RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TKFCQ3LXA3 575 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 DPP9Q86TI2 863 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 ADGRF4Q8IZF3 695 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 STAG2Q8N3U4 1231 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 CHST13Q8NET6 341 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 RANBP17Q9H2T7 1088 aaKnown RBP18.6■□□□□ 0.57
RAB40C-208ENST00000564703 BIN2Q9UBW5 565 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-208ENST00000564703 MAD2L2Q9UI95 211 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 PTCH2Q9Y6C5 1203 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 DOCK3Q8IZD9 2030 aa18.6■□□□□ 0.57
RAB40C-208ENST00000564703 PARP14Q460N5 1801 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 ALAS1P13196 640 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 CYP2B6P20813 491 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 RGS2P41220 211 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 IRF5Q13568 498 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 SLC9C1Q4G0N8 1177 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 FANCBQ8NB91 859 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 DDX11Q96FC9 970 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 AGBL1Q96MI9 1066 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 MMP19Q99542 508 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 LZTS2Q9BRK4 669 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 MYL10Q9BUA6 226 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 GJD2Q9UKL4 321 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 CCPG1Q9ULG6 757 aa18.59■□□□□ 0.57
RAB40C-208ENST00000564703 COL11A1P12107 1806 aaPredicted RBP18.58■□□□□ 0.57
RAB40C-208ENST00000564703 KLF18A0A0U1RQI7 1052 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 ZBTB43O43298 467 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 ADCY3O60266 1144 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 ICAM1P05362 532 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 TRAF1Q13077 416 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 MAP2K5Q13163 448 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 TRMT44Q8IYL2 757 aaKnown RBP18.58■□□□□ 0.56
RAB40C-208ENST00000564703 ABRAQ8N0Z2 381 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 BRF1Q92994 677 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 TRERF1Q96PN7 1200 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.56
RAB40C-208ENST00000564703 CPVLQ9H3G5 476 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 HOMER2Q9NSB8 354 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 PDRG1Q9NUG6 133 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 RIPK3Q9Y572 518 aa18.58■□□□□ 0.56
RAB40C-208ENST00000564703 XRCC5P13010 732 aaKnown RBP18.57■□□□□ 0.56
RAB40C-208ENST00000564703 GRK4P32298 578 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 PPP2R5BQ15173 497 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 MORN1Q5T089 497 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 APOA5Q6Q788 366 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 MICU3Q86XE3 530 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 CCDC144CPQ8IYA2 1237 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 ANKRD35Q8N283 1001 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 FBXL16Q8N461 479 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 SLAIN1Q8ND83 568 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 PXYLP1Q8TE99 480 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 ACAD9Q9H845 621 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 HPS5Q9UPZ3 1129 aa18.57■□□□□ 0.56
RAB40C-208ENST00000564703 ZNF536O15090 1300 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 CCDC196A0A1B0GTZ2 297 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 RXRAP19793 462 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 SMARCA1P28370 1054 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 ADORA2AP29274 412 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 GRB14Q14449 540 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 CDC37Q16543 378 aaPredicted RBP18.56■□□□□ 0.56
RAB40C-208ENST00000564703 C22orf23Q9BZE7 217 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 JMJD4Q9H9V9 463 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 RNF146Q9NTX7 359 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 RBM28Q9NW13 759 aaKnown RBP18.56■□□□□ 0.56
RAB40C-208ENST00000564703 BRPF3Q9ULD4 1205 aa18.56■□□□□ 0.56
RAB40C-208ENST00000564703 UBXN2AP68543 259 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 RTN1Q16799 776 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 FBXO11Q86XK2 927 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 RAB11FIP4Q86YS3 637 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
RAB40C-208ENST00000564703 ABHD8Q96I13 439 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 RIOX1Q9H6W3 641 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 ZSWIM8A7E2V4 1837 aa18.55■□□□□ 0.56
RAB40C-208ENST00000564703 GOLGA8AA7E2F4 631 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 GOLGA8BA8MQT2 603 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 ZBTB5O15062 677 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 RCAN1P53805 252 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 QRICH1Q2TAL8 776 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 USH1GQ495M9 461 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 USP6NLQ92738 828 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 APBA2Q99767 749 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 AMNQ9BXJ7 453 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 AGXT2Q9BYV1 514 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 SEC63Q9UGP8 760 aaKnown RBP18.54■□□□□ 0.56
RAB40C-208ENST00000564703 A0A0G2JMZ2 1700 aa18.54■□□□□ 0.56
RAB40C-208ENST00000564703 PNMA6FA0A0J9YX94 578 aa18.53■□□□□ 0.56
RAB40C-208ENST00000564703 ELNP15502 786 aa18.53■□□□□ 0.56
RAB40C-208ENST00000564703 METAP2P50579 478 aaKnown RBP eCLIP18.53■□□□□ 0.56
RAB40C-208ENST00000564703 NEK4P51957 841 aa18.53■□□□□ 0.56
RAB40C-208ENST00000564703 CCDC82Q8N4S0 544 aa18.53■□□□□ 0.56
RAB40C-208ENST00000564703 SH3TC2Q8TF17 1288 aa18.53■□□□□ 0.56
RAB40C-208ENST00000564703 SPZ1Q9BXG8 430 aa18.53■□□□□ 0.56
RAB40C-208ENST00000564703 MRPL11Q9Y3B7 192 aaKnown RBP18.53■□□□□ 0.56
RAB40C-208ENST00000564703 ZNFX1Q9P2E3 1918 aaKnown RBP18.53■□□□□ 0.56
RAB40C-208ENST00000564703 ABCB11O95342 1321 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 CCDC85CA6NKD9 419 aa18.52■□□□□ 0.56
RAB40C-208ENST00000564703 COBLO75128 1261 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms