RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 GABBR1Q9UBS5 961 aa8.28□□□□□ -1.08
HERPUD1-209ENST00000564678 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
HERPUD1-209ENST00000564678 FAM205AQ6ZU69 1335 aa8.28□□□□□ -1.08
HERPUD1-209ENST00000564678 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
HERPUD1-209ENST00000564678 PLSCR1O15162 318 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 PLEKHA8P1O95397 391 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 P4HBP07237 508 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 SCG2P13521 617 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 CALML3P27482 149 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 DNAJA1P31689 397 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 GJA5P36382 358 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TFAP4Q01664 338 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 NR6A1Q15406 480 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 CT47A1Q5JQC4 288 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 FAM47AQ5JRC9 791 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 NT5DC1Q5TFE4 455 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 AOPEPQ8N6M6 819 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TBC1D16Q8TBP0 767 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 SH3RF3Q8TEJ3 882 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 VPS54Q9P1Q0 977 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 IMPACTQ9P2X3 320 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 PCDHB6Q9Y5E3 794 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 CYP2D6P10635 497 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TXNRD1Q16881 649 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 LONRF3Q496Y0 759 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 GALNT17Q6IS24 598 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TMEM92Q6UXU6 159 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TRIML1Q8N9V2 468 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 FLAD1Q8NFF5 587 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TGFBRAP1Q8WUH2 860 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 ERCC4Q92889 916 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TNFRSF25Q93038 417 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 PRIMPOLQ96LW4 560 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 PHF12Q96QT6 1004 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 LZTS2Q9BRK4 669 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 IL17RBQ9NRM6 502 aa8.27□□□□□ -1.09
HERPUD1-209ENST00000564678 TRIM37O94972 964 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 TSPY3P0CV98 308 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 TSPY8P0CW00 308 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 SKIP12755 728 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 RASA1P20936 1047 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 PTGS1P23219 599 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 SMARCA1P28370 1054 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 BTDP43251 543 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 GSDMDP57764 484 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 DDR1Q08345 913 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 NPY5RQ15761 445 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 OLFM4Q6UX06 510 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 GLYCTKQ8IVS8 523 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 TEX2Q8IWB9 1127 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 MPNDQ8N594 471 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 SHISA4Q96DD7 197 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 PYM1Q9BRP8 204 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 COA1Q9GZY4 146 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 POLLQ9UGP5 575 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 DACH1Q9UI36 760 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 JAG2Q9Y219 1238 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 R3HCC1Q9Y3T6 440 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 MRPL42Q9Y6G3 142 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 GAKO14976 1311 aa8.26□□□□□ -1.09
HERPUD1-209ENST00000564678 NMT2O60551 498 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 PRMT3O60678 531 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 ICMTO60725 284 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 SARSP49591 514 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 NLRP5P59047 1200 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 GRM4Q14833 912 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 NCAPHQ15003 741 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 DNTTIP2Q5QJE6 756 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 MFSD14BQ5SR56 506 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 C16orf86Q6ZW13 317 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 APBB1IPQ7Z5R6 666 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 OSBPL5Q9H0X9 879 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 FAN1Q9Y2M0 1017 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 ATP6V0A2Q9Y487 856 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 PCDHA5Q9Y5H7 936 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 CCDC194A0A1B0GVG4 234 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 POLR2DO15514 142 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 NPR1P16066 1061 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 PLCD1P51178 756 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 ARHGAP4P98171 946 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 FANCCQ00597 558 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 MYL5Q02045 173 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 EVX2Q03828 476 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 PNOCQ13519 176 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 POSTNQ15063 836 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 GRIK5Q16478 980 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 PPP1R18Q6NYC8 613 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 FOXP4Q8IVH2 680 aaPredicted RBP8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 LRRC8AQ8IWT6 810 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 TEX11Q8IYF3 940 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 MLKLQ8NB16 471 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 NEDD1Q8NHV4 660 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 SPATA20Q8TB22 786 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 NRBP1Q9UHY1 535 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 DCTN4Q9UJW0 460 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 PYCARDQ9ULZ3 195 aa8.25□□□□□ -1.09
HERPUD1-209ENST00000564678 LRRC37AA6NMS7 1700 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms