RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 USP17L12C9JPN9 530 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 USP17L21D6R901 530 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 NPHP1O15259 732 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 PRKAB2O43741 272 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ZPR1O75312 459 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CLSTN1O94985 981 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 PBX1P40424 430 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 PTGER2P43116 358 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ADKP55263 362 aaKnown RBP8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CDK17Q00537 523 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 UBXN1Q04323 297 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 RBL2Q08999 1139 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 PSMD2Q13200 908 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 SMC1AQ14683 1233 aaKnown RBP8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ZNF174Q15697 407 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 PKN1Q16512 942 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ZNF569Q5MCW4 686 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CC2D1AQ6P1N0 951 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-249ENST00000564606 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CTR9Q6PD62 1173 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 FMNL3Q8IVF7 1028 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 TEX2Q8IWB9 1127 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 NELFBQ8WX92 580 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 DPF2Q92785 391 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 TSG101Q99816 390 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 PRDM10Q9NQV6 1147 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 DISC1Q9NRI5 854 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 GJB4Q9NTQ9 266 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 ABHD10Q9NUJ1 306 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 EXOC1Q9NV70 894 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 RNF14Q9UBS8 474 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 TOGARAM1Q9Y4F4 1720 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 STRCP1A6NGW2 1772 aa8.56□□□□□ -1.04
ATXN3-249ENST00000564606 CNTNAP5Q8WYK1 1306 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 ITGB4P16144 1822 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 PVALEFA0A1B0GWK0 134 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 LGALS16A8MUM7 142 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 PPP1R3GB7ZBB8 358 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 EVI5O60447 810 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TACC1O75410 805 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 RHOBTB3O94955 611 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 LDHBP07195 334 aaKnown RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TSPY3P0CV98 308 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TSPY8P0CW00 308 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 CASP14P31944 242 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 GUCY1A2P33402 732 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 KRT9P35527 623 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 FMR1Q06787 632 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 FUT2Q10981 343 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TRAF1Q13077 416 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 GRM4Q14833 912 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 NONOQ15233 471 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 KRT31Q15323 416 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 PPP1R18Q6NYC8 613 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 WDR93Q6P2C0 686 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 PIK3AP1Q6ZUJ8 805 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TMC4Q7Z404 712 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 FNBP4Q8N3X1 1017 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 KCTD17Q8N5Z5 321 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 MSANTD4Q8NCY6 345 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 PNMA1Q8ND90 353 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TRIM58Q8NG06 486 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TBC1D22AQ8WUA7 517 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TNFRSF25Q93038 417 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 NSUN4Q96CB9 384 aaKnown RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 RRP36Q96EU6 259 aaKnown RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 CDK5RAP3Q96JB5 506 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 TRIM47Q96LD4 638 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 SPZ1Q9BXG8 430 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 DCP1AQ9NPI6 582 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 SEC31BQ9NQW1 1179 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 SAMSN1Q9NSI8 373 aaKnown RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 MKRN1Q9UHC7 482 aaKnown RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 RAB21Q9UL25 225 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 MYO6Q9UM54 1294 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 CAPN11Q9UMQ6 739 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 MINPP1Q9UNW1 487 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 CTNND2Q9UQB3 1225 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 EPN1Q9Y6I3 576 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-249ENST00000564606 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
ATXN3-249ENST00000564606 SPATA31A1Q5TZJ5 1347 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 BCORQ6W2J9 1755 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 ROBO3Q96MS0 1386 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 KDM4FA0A1W2PPD8 638 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 ESYT2A0FGR8 921 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 TMEM232C9JQI7 657 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 PSMD14O00487 310 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 PES1O00541 588 aaKnown RBP8.54□□□□□ -1.04
ATXN3-249ENST00000564606 GNA14O95837 355 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 TRIM21P19474 475 aaKnown RBP8.54□□□□□ -1.04
ATXN3-249ENST00000564606 BMP6P22004 513 aa8.54□□□□□ -1.04
ATXN3-249ENST00000564606 CCNE1P24864 410 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms