RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PNMA2Q9UL42 364 aa17.72■□□□□ 0.43
SPG7-210ENST00000564409 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
SPG7-210ENST00000564409 HIP1O00291 1037 aa17.71■□□□□ 0.43
SPG7-210ENST00000564409 SOX1O00570 391 aaPredicted RBP17.71■□□□□ 0.43
SPG7-210ENST00000564409 DUSP11O75319 330 aaKnown RBP17.71■□□□□ 0.43
SPG7-210ENST00000564409 TOP1P11387 765 aaKnown RBP17.71■□□□□ 0.43
SPG7-210ENST00000564409 MDM2Q00987 491 aaPredicted RBP17.71■□□□□ 0.43
SPG7-210ENST00000564409 NMIQ13287 307 aaPredicted RBP17.71■□□□□ 0.43
SPG7-210ENST00000564409 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
SPG7-210ENST00000564409 PLEKHM2Q8IWE5 1019 aa17.71■□□□□ 0.43
SPG7-210ENST00000564409 NUP133Q8WUM0 1156 aa17.71■□□□□ 0.43
SPG7-210ENST00000564409 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
SPG7-210ENST00000564409 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
SPG7-210ENST00000564409 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
SPG7-210ENST00000564409 LTBP2Q14767 1821 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 MOXD2PA6NHM9 499 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 PGK1P00558 417 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 SDSP20132 328 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 BTNL9Q6UXG8 535 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 MFSD6Q6ZSS7 791 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 KCTD1Q719H9 257 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 FAM133AQ8N9E0 248 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 INCENPQ9NQS7 918 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 RNF146Q9NTX7 359 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.7■□□□□ 0.42
SPG7-210ENST00000564409 ZNF536O15090 1300 aa17.7■□□□□ 0.42
SPG7-210ENST00000564409 ASB14A6NK59 587 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 NMT2O60551 498 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 ADAMTS4O75173 837 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 CST5P28325 142 aaPredicted RBP17.69■□□□□ 0.42
SPG7-210ENST00000564409 TRIM60Q495X7 471 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 AKNAD1Q5T1N1 836 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 B4GALNT3Q6L9W6 998 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 ARMCX2Q7L311 632 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 PCSK9Q8NBP7 692 aaKnown RBP17.69■□□□□ 0.42
SPG7-210ENST00000564409 FERMT2Q96AC1 680 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 LRCH3Q96II8 777 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 TRERF1Q96PN7 1200 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
SPG7-210ENST00000564409 PRR12Q9ULL5 1215 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 TACC3Q9Y6A5 838 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 SYNRGQ9UMZ2 1314 aa17.69■□□□□ 0.42
SPG7-210ENST00000564409 A0A1W2PQ45 241 aaPredicted RBP17.68■□□□□ 0.42
SPG7-210ENST00000564409 A0A1W2PQY0 241 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 IGHDP01880 384 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 CCDC178Q5BJE1 867 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 RRP12Q5JTH9 1297 aaKnown RBP17.68■□□□□ 0.42
SPG7-210ENST00000564409 ZNF589Q86UQ0 364 aaPredicted RBP17.68■□□□□ 0.42
SPG7-210ENST00000564409 KLHDC9Q8NEP7 349 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 FGD4Q96M96 766 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 TOX2Q96NM4 488 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 TMEM47Q9BQJ4 181 aa17.68■□□□□ 0.42
SPG7-210ENST00000564409 A1CFQ9NQ94 594 aaKnown RBP17.68■□□□□ 0.42
SPG7-210ENST00000564409 LOC102724159A0A0B4J2E5 919 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 ICAM1P05362 532 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 ALAS1P13196 640 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 ACLYP53396 1101 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 NKX3-2P78367 333 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 TLE2Q04725 743 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 PWP2Q15269 919 aaKnown RBP17.67■□□□□ 0.42
SPG7-210ENST00000564409 CCDC96Q2M329 555 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 CCDC144BQ3MJ40 725 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 CCDC144CPQ8IYA2 1237 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 EXOC6Q8TAG9 804 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 ESR2Q92731 530 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 UPF3AQ9H1J1 476 aaKnown RBP17.67■□□□□ 0.42
SPG7-210ENST00000564409 RANBP17Q9H2T7 1088 aaKnown RBP17.67■□□□□ 0.42
SPG7-210ENST00000564409 PDLIM7Q9NR12 457 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 CCPG1Q9ULG6 757 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 LAMA4Q16363 1823 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 ELP1O95163 1332 aa17.67■□□□□ 0.42
SPG7-210ENST00000564409 ZNF213O14771 459 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 GJA9P57773 515 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 CCSAPQ6IQ19 270 aaPredicted RBP17.66■□□□□ 0.42
SPG7-210ENST00000564409 CCDC174Q6PII3 467 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 ANKRD33Q7Z3H0 272 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
SPG7-210ENST00000564409 STARD7Q9NQZ5 370 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 MROH7Q68CQ1 1323 aa17.66■□□□□ 0.42
SPG7-210ENST00000564409 DCDC2CA8MYV0 355 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 CLTBP09497 229 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 HAND2P61296 217 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 KCNA10Q16322 511 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 SYDE2Q5VT97 1194 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 FAM109BQ6ICB4 259 aaPredicted RBP17.65■□□□□ 0.42
SPG7-210ENST00000564409 DGKHQ86XP1 1220 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 GLT1D1Q96MS3 346 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 KATNBL1Q9H079 304 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 CYP39A1Q9NYL5 469 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 CTNNA3Q9UI47 895 aa17.65■□□□□ 0.42
SPG7-210ENST00000564409 KIAA0355O15063 1070 aa17.64■□□□□ 0.41
SPG7-210ENST00000564409 C6orf222P0C671 652 aaPredicted RBP17.64■□□□□ 0.41
SPG7-210ENST00000564409 GPATCH4Q5T3I0 446 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms