RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ATP1A1P05023 1023 aaKnown RBP13.95□□□□□ -0.18
COMMD4-209ENST00000564068 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 CYB5R4Q7L1T6 521 aa13.95□□□□□ -0.18
COMMD4-209ENST00000564068 TTC26A0AVF1 554 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 CLGNO14967 610 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 ZBTB16Q05516 673 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 TCIRG1Q13488 830 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 DNAJC10Q8IXB1 793 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 RRP36Q96EU6 259 aaKnown RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 TECP42680 631 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 ATP11AP98196 1134 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 TBC1D10CQ8IV04 446 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 NCAPGQ9BPX3 1015 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 GJC1P36383 396 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 EIF4A3P38919 411 aaKnown RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 HIBCHQ6NVY1 386 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 CRACR2BQ8N4Y2 399 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 SNX29Q8TEQ0 813 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 IFT74Q96LB3 600 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 GPR108Q9NPR9 543 aa13.94□□□□□ -0.18
COMMD4-209ENST00000564068 AATFQ9NY61 560 aaKnown RBP eCLIP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
COMMD4-209ENST00000564068 ACTN4O43707 911 aaKnown RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 CUL4BQ13620 913 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 UBE3CQ15386 1083 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 VSIG1Q86XK7 387 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 FMNL3Q8IVF7 1028 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 BLIDQ8IZY5 108 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 RWDD2AQ9UIY3 292 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 TUBE1Q9UJT0 475 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 CETN3O15182 167 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 PHKG2P15735 406 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 BCAMP50895 628 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 COL9A3Q14050 684 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 BEND6Q5SZJ8 279 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 ZNF658Q5TYW1 1059 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 INTS8Q75QN2 995 aaKnown RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 MB21D2Q8IYB1 491 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 MRRFQ96E11 262 aaKnown RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 ZSCAN10Q96SZ4 725 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 LSM14BQ9BX40 385 aaKnown RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 MROH7-TTC4A0A0A0MT08 1334 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 ZNF185O15231 689 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 RGS16O15492 202 aaPredicted RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 EEF1GP26641 437 aaKnown RBP13.93□□□□□ -0.18
COMMD4-209ENST00000564068 ADD2P35612 726 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 ZBED6P86452 979 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 GREM2Q9H772 168 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 STIM2Q9P246 746 aa13.93□□□□□ -0.18
COMMD4-209ENST00000564068 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 FNBP4Q8N3X1 1017 aaPredicted RBP13.92□□□□□ -0.18
COMMD4-209ENST00000564068 SH2D3CQ8N5H7 860 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 MB21D1Q8N884 522 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 PSD3Q9NYI0 1048 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 SERPINA10Q9UK55 444 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
COMMD4-209ENST00000564068 SCG2P13521 617 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 MTMR3Q13615 1198 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
COMMD4-209ENST00000564068 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 NKIRAS1Q9NYS0 192 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 ZNF609O15014 1411 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 KIDINS220Q9ULH0 1771 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 TFRCP02786 760 aaKnown RBP13.92□□□□□ -0.18
COMMD4-209ENST00000564068 ABCB4P21439 1286 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 PRPHP41219 470 aa13.92□□□□□ -0.18
COMMD4-209ENST00000564068 CTNNA2P26232 953 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 SLC8A1P32418 973 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 TFAP4Q01664 338 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 TRIM65Q6PJ69 517 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 PLVAPQ9BX97 442 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
COMMD4-209ENST00000564068 TFR2Q9UP52 801 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 CHUKO15111 745 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 PDE8AO60658 829 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 LDHCP07864 332 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 PLS1Q14651 629 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 ALS2CLQ60I27 953 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 CTNND1O60716 968 aaKnown RBP13.91□□□□□ -0.18
COMMD4-209ENST00000564068 GUCY1A2P33402 732 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 APBA1Q02410 837 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 NCAPHQ15003 741 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 VWA3BQ502W6 1294 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 DENND2CQ68D51 928 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 EMBQ6PCB8 327 aa13.91□□□□□ -0.18
COMMD4-209ENST00000564068 KRT26Q7Z3Y9 468 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms