RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 PNMA1Q8ND90 353 aa13.27□□□□□ -0.29
SNUPN-203ENST00000563875 DIS3LQ8TF46 1054 aaKnown RBP13.27□□□□□ -0.29
SNUPN-203ENST00000563875 FGD4Q96M96 766 aa13.27□□□□□ -0.29
SNUPN-203ENST00000563875 AGBL1Q96MI9 1066 aa13.27□□□□□ -0.29
SNUPN-203ENST00000563875 RANBP17Q9H2T7 1088 aaKnown RBP13.27□□□□□ -0.29
SNUPN-203ENST00000563875 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
SNUPN-203ENST00000563875 DIS3Q9Y2L1 958 aaKnown RBP13.27□□□□□ -0.29
SNUPN-203ENST00000563875 CTDP1Q9Y5B0 961 aaPredicted RBP13.27□□□□□ -0.29
SNUPN-203ENST00000563875 RBM8AQ9Y5S9 174 aaKnown RBP13.27□□□□□ -0.29
SNUPN-203ENST00000563875 LRRC37A2A6NM11 1700 aa13.27□□□□□ -0.29
SNUPN-203ENST00000563875 E7EWF7 191 aa13.26□□□□□ -0.29
SNUPN-203ENST00000563875 SYDE2Q5VT97 1194 aa13.26□□□□□ -0.29
SNUPN-203ENST00000563875 PRPF38BQ5VTL8 546 aaKnown RBP13.26□□□□□ -0.29
SNUPN-203ENST00000563875 CHST13Q8NET6 341 aa13.26□□□□□ -0.29
SNUPN-203ENST00000563875 GPCPD1Q9NPB8 672 aa13.26□□□□□ -0.29
SNUPN-203ENST00000563875 FBXO40Q9UH90 709 aa13.26□□□□□ -0.29
SNUPN-203ENST00000563875 NEFLP07196 543 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 TAL1P17542 331 aaPredicted RBP13.25□□□□□ -0.29
SNUPN-203ENST00000563875 SLC4A3P48751 1232 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 GPATCH4Q5T3I0 446 aaKnown RBP13.25□□□□□ -0.29
SNUPN-203ENST00000563875 CCDC174Q6PII3 467 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 PAWRQ96IZ0 340 aaKnown RBP13.25□□□□□ -0.29
SNUPN-203ENST00000563875 TINF2Q9BSI4 451 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 UBAC1Q9BSL1 405 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 ACAD9Q9H845 621 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 KAT14Q9H8E8 782 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 HOMER2Q9NSB8 354 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 RNF146Q9NTX7 359 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
SNUPN-203ENST00000563875 MYH6P13533 1939 aa13.25□□□□□ -0.29
SNUPN-203ENST00000563875 CEP290O15078 2479 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 ICAM1P05362 532 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 GOLGA8HP0CJ92 632 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 MUM1L1Q5H9M0 696 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 PRAMEF19Q5SWL8 479 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 MAMDC4Q6UXC1 1216 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
SNUPN-203ENST00000563875 MB21D2Q8IYB1 491 aaPredicted RBP13.24□□□□□ -0.29
SNUPN-203ENST00000563875 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 A1CFQ9NQ94 594 aaKnown RBP13.24□□□□□ -0.29
SNUPN-203ENST00000563875 NRBP1Q9UHY1 535 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 CCPG1Q9ULG6 757 aa13.24□□□□□ -0.29
SNUPN-203ENST00000563875 ASTN1O14525 1302 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 PFASO15067 1338 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 SYNGAP1Q96PV0 1343 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 SEPT4O43236 478 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 MSCO60682 206 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 ALAS1P13196 640 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 ANTXR2P58335 489 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 TRDNQ13061 729 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 COL9A3Q14050 684 aaPredicted RBP13.23□□□□□ -0.29
SNUPN-203ENST00000563875 NECTIN1Q15223 517 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 IFIT1BQ5T764 474 aaKnown RBP13.23□□□□□ -0.29
SNUPN-203ENST00000563875 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 ANKRD35Q8N283 1001 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 MSL3Q8N5Y2 521 aaKnown RBP13.23□□□□□ -0.29
SNUPN-203ENST00000563875 FAM133AQ8N9E0 248 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 DDX11Q96FC9 970 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 CPVLQ9H3G5 476 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 SENP2Q9HC62 589 aa13.23□□□□□ -0.29
SNUPN-203ENST00000563875 WDR19Q8NEZ3 1342 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 SLC27A2O14975 620 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 CDC45O75419 566 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 SNAI1O95863 264 aaPredicted RBP13.22□□□□□ -0.29
SNUPN-203ENST00000563875 ZNF865P0CJ78 1059 aaPredicted RBP13.22□□□□□ -0.29
SNUPN-203ENST00000563875 COL6A1P12109 1028 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 CNGA1P29973 690 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 CNTN2Q02246 1040 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 RALYLQ86SE5 291 aaKnown RBP13.22□□□□□ -0.29
SNUPN-203ENST00000563875 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
SNUPN-203ENST00000563875 LAMA2P24043 3122 aaKnown RBP13.21□□□□□ -0.29
SNUPN-203ENST00000563875 LAMA3Q16787 3333 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 NFIBO00712 420 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 CENPBP07199 599 aaPredicted RBP13.21□□□□□ -0.29
SNUPN-203ENST00000563875 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 CREB3L3Q68CJ9 461 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 CLEC4DQ8WXI8 215 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 HTATIP2Q9BUP3 242 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 MAD2L2Q9UI95 211 aa13.21□□□□□ -0.29
SNUPN-203ENST00000563875 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 IFIT3O14879 490 aaKnown RBP13.2□□□□□ -0.3
SNUPN-203ENST00000563875 PARP1P09874 1014 aaKnown RBP13.2□□□□□ -0.3
SNUPN-203ENST00000563875 ERICH6BQ5W0A0 696 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 ADGRF4Q8IZF3 695 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 KATNBL1Q9H079 304 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 C11orf49Q9H6J7 331 aa13.2□□□□□ -0.3
SNUPN-203ENST00000563875 PALM3A6NDB9 673 aaPredicted RBP13.19□□□□□ -0.3
SNUPN-203ENST00000563875 DNM1LO00429 736 aa13.19□□□□□ -0.3
SNUPN-203ENST00000563875 ADCY6O43306 1168 aa13.19□□□□□ -0.3
SNUPN-203ENST00000563875 TROAPQ12815 778 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms