RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 LGALS16A8MUM7 142 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 HSPA2P54652 639 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 RNASE9P60153 205 aaKnown RBP13.2□□□□□ -0.3
ABCA3-203ENST00000563623 TROAPQ12815 778 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 LETM2Q2VYF4 491 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
ABCA3-203ENST00000563623 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 PDXDC2PQ6P474 469 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 LRRC31Q6UY01 552 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 ANKRD18AQ8IVF6 992 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 CENPHQ9H3R5 247 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 NHEJ1Q9H9Q4 299 aaPredicted RBP13.2□□□□□ -0.3
ABCA3-203ENST00000563623 POLD4Q9HCU8 107 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 LRWD1Q9UFC0 647 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 CALML3P27482 149 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 CCT5P48643 541 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 DNM2P50570 870 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 HERVK_113P62684 666 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 C2CD5Q86YS7 1000 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 HPS3Q969F9 1004 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 CRNKL1Q9BZJ0 848 aaKnown RBP13.2□□□□□ -0.3
ABCA3-203ENST00000563623 MKRN1Q9UHC7 482 aaKnown RBP13.2□□□□□ -0.3
ABCA3-203ENST00000563623 TACC1O75410 805 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 ATP6V1AP38606 617 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 IL17AQ16552 155 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 SELENOOQ9BVL4 669 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 CPVLQ9H3G5 476 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 C4AP0C0L4 1744 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 C4BP0C0L5 1744 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 ATRNO75882 1429 aa13.2□□□□□ -0.3
ABCA3-203ENST00000563623 MYO5AQ9Y4I1 1855 aaKnown RBP13.2□□□□□ -0.3
ABCA3-203ENST00000563623 KIF1AQ12756 1690 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 EXOC5O00471 708 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 MARCH6O60337 910 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 CNOT6LQ96LI5 555 aaKnown RBP13.19□□□□□ -0.3
ABCA3-203ENST00000563623 DISC1Q9NRI5 854 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
ABCA3-203ENST00000563623 SSBP05455 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
ABCA3-203ENST00000563623 TFAP4Q01664 338 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 TRAPPC11Q7Z392 1133 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 CACNA2D4Q7Z3S7 1137 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 CDK5RAP3Q96JB5 506 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 MLXIPQ9HAP2 919 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 HPCAL4Q9UM19 191 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 LONP1P36776 959 aaKnown RBP13.19□□□□□ -0.3
ABCA3-203ENST00000563623 PAFAH1B1P43034 410 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 E2F4Q16254 413 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 SLC39A2Q9NP94 309 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 CNTNAP5Q8WYK1 1306 aa13.19□□□□□ -0.3
ABCA3-203ENST00000563623 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
ABCA3-203ENST00000563623 MOCS3O95396 460 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 LIG3P49916 1009 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 ARID5AQ03989 594 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 UIMC1Q96RL1 719 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 IFIH1Q9BYX4 1025 aaKnown RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 TMEM60Q9H2L4 133 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 GEMIN8Q9NWZ8 242 aaKnown RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 RCCD1A6NED2 376 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 ZEB2O60315 1214 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 DDAH1O94760 285 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 PLEKP08567 350 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 AMPD2Q01433 879 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 EZH2Q15910 746 aaKnown RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 IFT81Q8WYA0 676 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 NUTM2BA6NNL0 878 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 NUTM2EB1AL46 878 aaPredicted RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 MYBL2P10244 700 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 EEF1GP26641 437 aaKnown RBP13.18□□□□□ -0.3
ABCA3-203ENST00000563623 FUT2Q10981 343 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 CABP7Q86V35 215 aa13.18□□□□□ -0.3
ABCA3-203ENST00000563623 SHTN1A0MZ66 631 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 BUB1O43683 1085 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 FAM107BQ9H098 131 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 MST1RQ04912 1400 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 H0YHG0 523 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 PDE2AO00408 941 aaPredicted RBP13.17□□□□□ -0.3
ABCA3-203ENST00000563623 EBAG9O00559 213 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 CCNT1O60563 726 aaKnown RBP13.17□□□□□ -0.3
ABCA3-203ENST00000563623 USP17L8P0C7I0 530 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 FCER1AP12319 257 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 ATP1A2P50993 1020 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 RCAN1P53805 252 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms