RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 TAL1P17542 331 aaPredicted RBP17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 SLC16A2P36021 539 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 ANTXR2P58335 489 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 SNAP25P60880 206 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 NECTIN1Q15223 517 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 MFSD14CQ5VZR4 134 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 MAMDC4Q6UXC1 1216 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 MB21D2Q8IYB1 491 aaPredicted RBP17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 CHST13Q8NET6 341 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 FRMPD2Q68DX3 1309 aaPredicted RBP17.4■□□□□ 0.38
RPUSD1-204ENST00000563560 KCTD2Q14681 263 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 SYDE2Q5VT97 1194 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 TINF2Q9BSI4 451 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 KATNBL1Q9H079 304 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 PFASO15067 1338 aa17.39■□□□□ 0.37
RPUSD1-204ENST00000563560 SNAI1O95863 264 aaPredicted RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 ICAM1P05362 532 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 ZNF865P0CJ78 1059 aaPredicted RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 SLC35G1Q2M3R5 365 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 MUM1L1Q5H9M0 696 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 PRAMEF19Q5SWL8 479 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 PRPF38BQ5VTL8 546 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 FAM133AQ8N9E0 248 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 FBXO40Q9UH90 709 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 DDX20Q9UHI6 824 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 LAMA3Q16787 3333 aa17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 BAZ2BQ9UIF8 2168 aaKnown RBP17.38■□□□□ 0.37
RPUSD1-204ENST00000563560 TFRCP02786 760 aaKnown RBP17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 CCDC96Q2M329 555 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 CLEC4DQ8WXI8 215 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 CPVLQ9H3G5 476 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 GPCPD1Q9NPB8 672 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 RNF146Q9NTX7 359 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 NRBP1Q9UHY1 535 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 SYNGAP1Q96PV0 1343 aa17.37■□□□□ 0.37
RPUSD1-204ENST00000563560 SOWAHBA6NEL2 793 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 SEPT4O43236 478 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 GOLGA8HP0CJ92 632 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 GPATCH4Q5T3I0 446 aaKnown RBP17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 CCDC174Q6PII3 467 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 ACAD9Q9H845 621 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 SLC5A4Q9NY91 659 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 WDR19Q8NEZ3 1342 aa17.36■□□□□ 0.37
RPUSD1-204ENST00000563560 SLC27A2O14975 620 aa17.35■□□□□ 0.37
RPUSD1-204ENST00000563560 CNTN2Q02246 1040 aa17.35■□□□□ 0.37
RPUSD1-204ENST00000563560 MTMR8Q96EF0 704 aa17.35■□□□□ 0.37
RPUSD1-204ENST00000563560 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
RPUSD1-204ENST00000563560 CYP39A1Q9NYL5 469 aa17.35■□□□□ 0.37
RPUSD1-204ENST00000563560 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 ADCY6O43306 1168 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 TROAPQ12815 778 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 IKQ13123 557 aaPredicted RBP17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 STAG2Q8N3U4 1231 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 KAT14Q9H8E8 782 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 MAD2L2Q9UI95 211 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 CCPG1Q9ULG6 757 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 SZT2Q5T011 3432 aa17.34■□□□□ 0.37
RPUSD1-204ENST00000563560 NFIBO00712 420 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 MSCO60682 206 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 CDC45O75419 566 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 ALAS1P13196 640 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 ASPRV1Q53RT3 343 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 IFIT1BQ5T764 474 aaKnown RBP17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 ERICH6BQ5W0A0 696 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 ADGRF4Q8IZF3 695 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 ANKRD35Q8N283 1001 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 MORC4Q8TE76 937 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 UBAC1Q9BSL1 405 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 JMJD4Q9H9V9 463 aa17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.36
RPUSD1-204ENST00000563560 KIAA1217Q5T5P2 1943 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 SLC4A3P48751 1232 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 TSGA10IPQ3SY00 556 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 NECAB2Q7Z6G3 386 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 KCNB2Q92953 911 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 DDX11Q96FC9 970 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 PURBQ96QR8 312 aaKnown RBP17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 PRO3102Q9H379 93 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 LY9Q9HBG7 655 aa17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 CTDP1Q9Y5B0 961 aaPredicted RBP17.32■□□□□ 0.36
RPUSD1-204ENST00000563560 DDX49Q9Y6V7 483 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms