RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 DIAPH3Q9NSV4 1193 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 RNF146Q9NTX7 359 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 PRR12Q9ULL5 1215 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 CNPY2Q9Y2B0 182 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 LAMA3Q16787 3333 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 KIAA1217Q5T5P2 1943 aa18.59■□□□□ 0.57
SF3B3-203ENST00000562874 SNAI1O95863 264 aaPredicted RBP18.58■□□□□ 0.56
SF3B3-203ENST00000562874 FGRP09769 529 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 ALAS1P13196 640 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 AKR1A1P14550 325 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 PDE4AP27815 886 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 ADCYAP1R1P41586 468 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 OAZ1P54368 228 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 PPP4R3BQ5MIZ7 849 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 TTBK2Q6IQ55 1244 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 ACAD9Q9H845 621 aa18.58■□□□□ 0.56
SF3B3-203ENST00000562874 SYNGAP1Q96PV0 1343 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 SYNRGQ9UMZ2 1314 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 A0A1W2PPC1 479 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 SLC16A2P36021 539 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 NOVP48745 357 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 TRIM60Q495X7 471 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 AKNAD1Q5T1N1 836 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 RCSD1Q6JBY9 416 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 CHST13Q8NET6 341 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 CHURC1Q8WUH1 139 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 TMEM47Q9BQJ4 181 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 ZKSCAN3Q9BRR0 538 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 UBE2OQ9C0C9 1292 aaKnown RBP18.57■□□□□ 0.56
SF3B3-203ENST00000562874 A1CFQ9NQ94 594 aaKnown RBP18.57■□□□□ 0.56
SF3B3-203ENST00000562874 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 NRBP1Q9UHY1 535 aa18.57■□□□□ 0.56
SF3B3-203ENST00000562874 DDX49Q9Y6V7 483 aaKnown RBP18.57■□□□□ 0.56
SF3B3-203ENST00000562874 ADCY6O43306 1168 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 IRX5P78411 483 aaPredicted RBP18.56■□□□□ 0.56
SF3B3-203ENST00000562874 CNTN2Q02246 1040 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 MUM1L1Q5H9M0 696 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 SLC39A5Q6ZMH5 540 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 MFSD6Q6ZSS7 791 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.56■□□□□ 0.56
SF3B3-203ENST00000562874 ARMCX2Q7L311 632 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 DCAF4Q8WV16 495 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 IL25Q9H293 177 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 GPCPD1Q9NPB8 672 aa18.56■□□□□ 0.56
SF3B3-203ENST00000562874 PRDM5Q9NQX1 630 aaPredicted RBP18.56■□□□□ 0.56
SF3B3-203ENST00000562874 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.56■□□□□ 0.56
SF3B3-203ENST00000562874 GBF1Q92538 1859 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 MYADML2A6NDP7 307 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 ADAMTS4O75173 837 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 TOP1P11387 765 aaKnown RBP18.55■□□□□ 0.56
SF3B3-203ENST00000562874 GSPT1P15170 499 aaKnown RBP18.55■□□□□ 0.56
SF3B3-203ENST00000562874 BMP8BP34820 402 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 MFAP1P55081 439 aaKnown RBP18.55■□□□□ 0.56
SF3B3-203ENST00000562874 MAMDC4Q6UXC1 1216 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 TICAM2Q86XR7 235 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 TRERF1Q96PN7 1200 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 CCPG1Q9ULG6 757 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 MYH7BA7E2Y1 1941 aa18.55■□□□□ 0.56
SF3B3-203ENST00000562874 FDX1P10109 184 aa18.54■□□□□ 0.56
SF3B3-203ENST00000562874 ZNF467Q7Z7K2 595 aaPredicted RBP18.54■□□□□ 0.56
SF3B3-203ENST00000562874 CCDC144CPQ8IYA2 1237 aa18.54■□□□□ 0.56
SF3B3-203ENST00000562874 TDHQ8IZJ6 230 aa18.54■□□□□ 0.56
SF3B3-203ENST00000562874 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
SF3B3-203ENST00000562874 PHF24Q9UPV7 400 aa18.54■□□□□ 0.56
SF3B3-203ENST00000562874 ASTN1O14525 1302 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 A0A1W2PQ45 241 aaPredicted RBP18.53■□□□□ 0.56
SF3B3-203ENST00000562874 A0A1W2PQY0 241 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 POTEB2H3BUK9 544 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 ZNF213O14771 459 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 PLA2G6O60733 806 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 PDHBP11177 359 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 ACVR2BQ13705 512 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 SNX17Q15036 470 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 SYDE2Q5VT97 1194 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 RNF180Q86T96 592 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 FAM133AQ8N9E0 248 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 PURBQ96QR8 312 aaKnown RBP18.53■□□□□ 0.56
SF3B3-203ENST00000562874 RANBP17Q9H2T7 1088 aaKnown RBP18.53■□□□□ 0.56
SF3B3-203ENST00000562874 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
SF3B3-203ENST00000562874 BAZ2BQ9UIF8 2168 aaKnown RBP18.53■□□□□ 0.56
SF3B3-203ENST00000562874 SOWAHBA6NEL2 793 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 B4E1Z4 1266 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 PTGS1P23219 599 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 CCDC144BQ3MJ40 725 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 TTC22Q5TAA0 569 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 NSMFQ6X4W1 530 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 KATNBL1Q9H079 304 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 CPVLQ9H3G5 476 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 RNF41Q9H4P4 317 aaPredicted RBP18.52■□□□□ 0.56
SF3B3-203ENST00000562874 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 PRKAG2Q9UGJ0 569 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 FAM184BQ9ULE4 1060 aa18.52■□□□□ 0.56
SF3B3-203ENST00000562874 HIP1O00291 1037 aa18.51■□□□□ 0.55
SF3B3-203ENST00000562874 KDM4AO75164 1064 aa18.51■□□□□ 0.55
SF3B3-203ENST00000562874 ICAM1P05362 532 aa18.51■□□□□ 0.55
SF3B3-203ENST00000562874 TKFCQ3LXA3 575 aa18.51■□□□□ 0.55
SF3B3-203ENST00000562874 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
SF3B3-203ENST00000562874 ESR2Q92731 530 aa18.51■□□□□ 0.55
SF3B3-203ENST00000562874 LBHD1Q9BQE6 289 aaPredicted RBP18.51■□□□□ 0.55
SF3B3-203ENST00000562874 ABHD16BQ9H3Z7 469 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms