RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 ASTN1O14525 1302 aa13.09□□□□□ -0.31
KLHDC4-209ENST00000562872 RARBP10826 455 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SDSP20132 328 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 PTGS1P23219 599 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SLC16A2P36021 539 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 STAT2P52630 851 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SNX17Q15036 470 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 CCDC174Q6PII3 467 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 MAMDC4Q6UXC1 1216 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SH3RF1Q7Z6J0 888 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 TDHQ8IZJ6 230 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 IL25Q9H293 177 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 RNF146Q9NTX7 359 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 NEDD4P46934 1319 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SYNRGQ9UMZ2 1314 aa13.08□□□□□ -0.32
KLHDC4-209ENST00000562872 SOWAHBA6NEL2 793 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 AKR1A1P14550 325 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 OAZ1P54368 228 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 IRX6P78412 446 aaPredicted RBP13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 AAMPQ13685 434 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 CHST13Q8NET6 341 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 KATNBL1Q9H079 304 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 A1CFQ9NQ94 594 aaKnown RBP13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 ZHX1Q9UKY1 873 aaPredicted RBP13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 PHF24Q9UPV7 400 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 CNPY2Q9Y2B0 182 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 FRMPD2Q68DX3 1309 aaPredicted RBP13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 SYNGAP1Q96PV0 1343 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 MCM3APO60318 1980 aa13.07□□□□□ -0.32
KLHDC4-209ENST00000562872 LCTP09848 1927 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 LRRC37A2A6NM11 1700 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 LAMA2P24043 3122 aaKnown RBP13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 TRIM43BA6NCK2 446 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 ALAS1P13196 640 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 ITGB8P26012 769 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 PDE4AP27815 886 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 TLE2Q04725 743 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 CCDC96Q2M329 555 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 CWC27Q6UX04 472 aaKnown RBP13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 Q7L0L9 218 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 ARMCX2Q7L311 632 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 ZNF467Q7Z7K2 595 aaPredicted RBP13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 FAM133AQ8N9E0 248 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 CHURC1Q8WUH1 139 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 TRIM43Q96BQ3 446 aaPredicted RBP13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 ACAD9Q9H845 621 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 PRDM5Q9NQX1 630 aaPredicted RBP13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 PDLIM7Q9NR12 457 aa13.06□□□□□ -0.32
KLHDC4-209ENST00000562872 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 PLA2G6O60733 806 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 CCDC144BQ3MJ40 725 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 AKNAD1Q5T1N1 836 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 TMEM63BQ5T3F8 832 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 CCSAPQ6IQ19 270 aaPredicted RBP13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 MSL3Q8N5Y2 521 aaKnown RBP13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 KLHDC9Q8NEP7 349 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 DCAF4Q8WV16 495 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 FBXO40Q9UH90 709 aa13.05□□□□□ -0.32
KLHDC4-209ENST00000562872 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 COL6A3P12111 3177 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 POTEB2H3BUK9 544 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 CTAGE5O15320 804 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 PDHBP11177 359 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 LRIT3Q3SXY7 679 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 RNF180Q86T96 592 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 BADQ92934 168 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 RANBP17Q9H2T7 1088 aaKnown RBP13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 TCP11L1Q9NUJ3 509 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
KLHDC4-209ENST00000562872 NFIBO00712 420 aa13.03□□□□□ -0.32
KLHDC4-209ENST00000562872 PQBP1O60828 265 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms