RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 TKFCQ3LXA3 575 aa19.17■□□□□ 0.66
PKD1-226ENST00000562425 RASGRP2Q7LDG7 609 aa19.17■□□□□ 0.66
PKD1-226ENST00000562425 CHST13Q8NET6 341 aa19.17■□□□□ 0.66
PKD1-226ENST00000562425 IGDCC4Q8TDY8 1250 aa19.17■□□□□ 0.66
PKD1-226ENST00000562425 MMP19Q99542 508 aa19.17■□□□□ 0.66
PKD1-226ENST00000562425 DOCK3Q8IZD9 2030 aa19.17■□□□□ 0.66
PKD1-226ENST00000562425 INHAP05111 366 aa19.16■□□□□ 0.66
PKD1-226ENST00000562425 HMGB1P09429 215 aaKnown RBP19.16■□□□□ 0.66
PKD1-226ENST00000562425 ANTXR2P58335 489 aa19.16■□□□□ 0.66
PKD1-226ENST00000562425 MTFR1Q15390 333 aa19.16■□□□□ 0.66
PKD1-226ENST00000562425 CATIPQ7Z7H3 387 aa19.16■□□□□ 0.66
PKD1-226ENST00000562425 HTATIP2Q9BUP3 242 aa19.16■□□□□ 0.66
PKD1-226ENST00000562425 RANBP17Q9H2T7 1088 aaKnown RBP19.16■□□□□ 0.66
PKD1-226ENST00000562425 GOLGA8HP0CJ92 632 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 HSPA4P34932 840 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 MFSD14CQ5VZR4 134 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 UBE2Q1Q7Z7E8 422 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 DDX11Q96FC9 970 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 RIPK3Q9Y572 518 aa19.15■□□□□ 0.66
PKD1-226ENST00000562425 ICAM1P05362 532 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 CCL5P13501 91 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 NFXL1Q6ZNB6 911 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 RASEFQ8IZ41 740 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 TRIB2Q92519 343 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 DPF3Q92784 378 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 KCNB2Q92953 911 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 AGBL1Q96MI9 1066 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 RNF208Q9H0X6 261 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 ACAD9Q9H845 621 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 CCPG1Q9ULG6 757 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 ZNF536O15090 1300 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 WDR19Q8NEZ3 1342 aa19.14■□□□□ 0.65
PKD1-226ENST00000562425 CCDC69A6NI79 296 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 DHX16O60231 1041 aaKnown RBP19.13■□□□□ 0.65
PKD1-226ENST00000562425 ALAS1P13196 640 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 LIFRP42702 1097 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 SNAP25P60880 206 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.13■□□□□ 0.65
PKD1-226ENST00000562425 DHX32Q7L7V1 743 aaKnown RBP19.13■□□□□ 0.65
PKD1-226ENST00000562425 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 TRERF1Q96PN7 1200 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 UBA5Q9GZZ9 404 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 LY9Q9HBG7 655 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 HMX1Q9NP08 348 aaPredicted RBP19.13■□□□□ 0.65
PKD1-226ENST00000562425 RNF146Q9NTX7 359 aa19.13■□□□□ 0.65
PKD1-226ENST00000562425 DIS3Q9Y2L1 958 aaKnown RBP19.13■□□□□ 0.65
PKD1-226ENST00000562425 COL11A1P12107 1806 aaPredicted RBP19.13■□□□□ 0.65
PKD1-226ENST00000562425 RPTORQ8N122 1335 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 KLRF2D3W0D1 207 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 SH2B2O14492 632 aaPredicted RBP19.12■□□□□ 0.65
PKD1-226ENST00000562425 COBLO75128 1261 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 DDAH1O94760 285 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 PSMA5P28066 241 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 GRM4Q14833 912 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 CCL14Q16627 93 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 OLFML2BQ68BL8 750 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 NPLOC4Q8TAT6 608 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 MAP3K14Q99558 947 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 HOMER2Q9NSB8 354 aa19.12■□□□□ 0.65
PKD1-226ENST00000562425 PALM3A6NDB9 673 aaPredicted RBP19.11■□□□□ 0.65
PKD1-226ENST00000562425 CALM1P0DP23 149 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 CALM2P0DP24 149 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 CALM3P0DP25 149 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 KIF5BP33176 963 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 TROAPQ12815 778 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 CHRDL2Q6WN34 429 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 SYNE3Q6ZMZ3 975 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 ADGRF4Q8IZF3 695 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 ZNF654Q8IZM8 581 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 CTCFLQ8NI51 663 aaPredicted RBP19.11■□□□□ 0.65
PKD1-226ENST00000562425 USP26Q9BXU7 913 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 UNC93B1Q9H1C4 597 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 SENP2Q9HC62 589 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 MAD2L2Q9UI95 211 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 SNX14Q9Y5W7 946 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 NR2E3Q9Y5X4 410 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 PLXNB2O15031 1838 aa19.11■□□□□ 0.65
PKD1-226ENST00000562425 SZT2Q5T011 3432 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 PGK2P07205 417 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 PRKAR2AP13861 404 aaKnown RBP19.1■□□□□ 0.65
PKD1-226ENST00000562425 EXOSC10Q01780 885 aaKnown RBP19.1■□□□□ 0.65
PKD1-226ENST00000562425 ZNF792Q3KQV3 632 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 ADCK5Q3MIX3 580 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 MAP3K21Q5TCX8 1036 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 STAG2Q8N3U4 1231 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 NUP133Q8WUM0 1156 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 MAML3Q96JK9 1138 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 JAKMIP1Q96N16 626 aaKnown RBP19.1■□□□□ 0.65
PKD1-226ENST00000562425 VAT1LQ9HCJ6 419 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 SLC12A7Q9Y666 1083 aa19.1■□□□□ 0.65
PKD1-226ENST00000562425 ZNF236Q9UL36 1845 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 PFASO15067 1338 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 FARP2O94887 1054 aaPredicted RBP19.09■□□□□ 0.65
PKD1-226ENST00000562425 GNAQP50148 359 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 FGD1P98174 961 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 CACNB2Q08289 660 aaPredicted RBP19.09■□□□□ 0.65
PKD1-226ENST00000562425 TRIM32Q13049 653 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 TRAF1Q13077 416 aa19.09■□□□□ 0.65
PKD1-226ENST00000562425 CDC37Q16543 378 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms