RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 SOX1O00570 391 aaPredicted RBP9.77□□□□□ -0.85
GINS3-204ENST00000561952 COPB2P35606 906 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 SLC1A4P43007 532 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 RTP1P59025 263 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 ZNF792Q3KQV3 632 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 MCMDC2Q4G0Z9 681 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 CCDC174Q6PII3 467 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 CHD1LQ86WJ1 897 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 ANKRD35Q8N283 1001 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 LRCH3Q96II8 777 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 TINF2Q9BSI4 451 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 PRO3102Q9H379 93 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 PRDM5Q9NQX1 630 aaPredicted RBP9.77□□□□□ -0.85
GINS3-204ENST00000561952 HELLSQ9NRZ9 838 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 FEM1BQ9UK73 627 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
GINS3-204ENST00000561952 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.77□□□□□ -0.85
GINS3-204ENST00000561952 LAMA4Q16363 1823 aa9.77□□□□□ -0.85
GINS3-204ENST00000561952 LAMA2P24043 3122 aaKnown RBP9.76□□□□□ -0.85
GINS3-204ENST00000561952 SNPHO15079 494 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 PGK1P00558 417 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 IGHA2P01877 340 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 FGAP02671 866 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 RARBP10826 455 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 ADCYAP1R1P41586 468 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 STAT2P52630 851 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 SMC5Q8IY18 1101 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 ARRDC4Q8NCT1 418 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 GMCL1P1Q8NEA9 526 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 MKL1Q969V6 931 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 GDF15Q99988 308 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 UBE2OQ9C0C9 1292 aaKnown RBP9.76□□□□□ -0.85
GINS3-204ENST00000561952 SLC38A10Q9HBR0 1119 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 XPNPEP3Q9NQH7 507 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 IL17RBQ9NRM6 502 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
GINS3-204ENST00000561952 LTBP2Q14767 1821 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 FRMPD2Q68DX3 1309 aaPredicted RBP9.76□□□□□ -0.85
GINS3-204ENST00000561952 CCDC171Q6TFL3 1326 aa9.76□□□□□ -0.85
GINS3-204ENST00000561952 HSPD1P10809 573 aaKnown RBP9.75□□□□□ -0.85
GINS3-204ENST00000561952 ALAS1P13196 640 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 NUBP1P53384 320 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 NUCB1Q02818 461 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 LRRC41Q15345 812 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 TRIM60Q495X7 471 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 CWC27Q6UX04 472 aaKnown RBP9.75□□□□□ -0.85
GINS3-204ENST00000561952 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 AGBL1Q96MI9 1066 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 DIAPH3Q9NSV4 1193 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 RNF146Q9NTX7 359 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 PRKAG2Q9UGJ0 569 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 CNPY2Q9Y2B0 182 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 DDX49Q9Y6V7 483 aaKnown RBP9.75□□□□□ -0.85
GINS3-204ENST00000561952 LCTP09848 1927 aa9.75□□□□□ -0.85
GINS3-204ENST00000561952 LRRC37A2A6NM11 1700 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
GINS3-204ENST00000561952 AKR1A1P14550 325 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 SDSP20132 328 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 SLC16A2P36021 539 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 MMRN1Q13201 1228 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 TTBK2Q6IQ55 1244 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 FAM160B2Q86V87 743 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 TBC1D10CQ8IV04 446 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 CHURC1Q8WUH1 139 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 STAG1Q8WVM7 1258 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 GMCL1Q96IK5 515 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 LBHD1Q9BQE6 289 aaPredicted RBP9.74□□□□□ -0.85
GINS3-204ENST00000561952 ZKSCAN3Q9BRR0 538 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 ACAD9Q9H845 621 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 GPCPD1Q9NPB8 672 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 ANAPC4Q9UJX5 808 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 NEDD4P46934 1319 aa9.74□□□□□ -0.85
GINS3-204ENST00000561952 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 ORC4O43929 436 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 SNAI1O95863 264 aaPredicted RBP9.73□□□□□ -0.85
GINS3-204ENST00000561952 CENPBP07199 599 aaPredicted RBP9.73□□□□□ -0.85
GINS3-204ENST00000561952 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
GINS3-204ENST00000561952 CNTN2Q02246 1040 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 ALX1Q15699 326 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 MUM1L1Q5H9M0 696 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 NSMFQ6X4W1 530 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 SLC39A5Q6ZMH5 540 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 MFSD6Q6ZSS7 791 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 ARMCX2Q7L311 632 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 RNF180Q86T96 592 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 SPNS2Q8IVW8 549 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 TDHQ8IZJ6 230 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 CHST13Q8NET6 341 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 FGD4Q96M96 766 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 TRERF1Q96PN7 1200 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
GINS3-204ENST00000561952 FBXO40Q9UH90 709 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 CCPG1Q9ULG6 757 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 PRR12Q9ULL5 1215 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 SYNPO2Q9UMS6 1093 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 DIS3Q9Y2L1 958 aaKnown RBP9.73□□□□□ -0.85
GINS3-204ENST00000561952 ZNF536O15090 1300 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 SYNRGQ9UMZ2 1314 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms