RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 LENG1Q96BZ8 264 aaPredicted RBP17.31■□□□□ 0.36
SPG7-205ENST00000561945 RAVER2Q9HCJ3 691 aaKnown RBP17.31■□□□□ 0.36
SPG7-205ENST00000561945 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.31■□□□□ 0.36
SPG7-205ENST00000561945 SLC3A2P08195 630 aaKnown RBP17.3■□□□□ 0.36
SPG7-205ENST00000561945 TSPY3P0CV98 308 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 TSPY8P0CW00 308 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 CDK7P50613 346 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 GJA9P57773 515 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 TFAP4Q01664 338 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 ZNF697Q5TEC3 545 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 FAM160B2Q86V87 743 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 FAM133AQ8N9E0 248 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 NAPBQ9H115 298 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 STARD7Q9NQZ5 370 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 ANAPC4Q9UJX5 808 aa17.3■□□□□ 0.36
SPG7-205ENST00000561945 LCTP09848 1927 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 CTAGE5O15320 804 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 FGRP09769 529 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 MX1P20591 662 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 STAT2P52630 851 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 EPHB4P54760 987 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 KCNA10Q16322 511 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 ANKRD35Q8N283 1001 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 STAG1Q8WVM7 1258 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 FSD1Q9BTV5 496 aa17.29■□□□□ 0.36
SPG7-205ENST00000561945 MROH7Q68CQ1 1323 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 MYADML2A6NDP7 307 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 TMEM232C9JQI7 657 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 TKFCQ3LXA3 575 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 ARMCX2Q7L311 632 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 PCSK9Q8NBP7 692 aaKnown RBP17.28■□□□□ 0.36
SPG7-205ENST00000561945 CHURC1Q8WUH1 139 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 SEMA6BQ9H3T3 888 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 IL17RBQ9NRM6 502 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
SPG7-205ENST00000561945 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
SPG7-205ENST00000561945 RAG1P15918 1043 aa17.27■□□□□ 0.36
SPG7-205ENST00000561945 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
SPG7-205ENST00000561945 GLT1D1Q96MS3 346 aa17.27■□□□□ 0.36
SPG7-205ENST00000561945 CDX2Q99626 313 aaPredicted RBP17.27■□□□□ 0.36
SPG7-205ENST00000561945 TTYH1Q9H313 450 aaPredicted RBP17.27■□□□□ 0.36
SPG7-205ENST00000561945 A1CFQ9NQ94 594 aaKnown RBP17.27■□□□□ 0.36
SPG7-205ENST00000561945 TMEM39AQ9NV64 488 aa17.27■□□□□ 0.36
SPG7-205ENST00000561945 ZHX1Q9UKY1 873 aaPredicted RBP17.27■□□□□ 0.36
SPG7-205ENST00000561945 CTDP1Q9Y5B0 961 aaPredicted RBP17.27■□□□□ 0.36
SPG7-205ENST00000561945 DCDC2CA8MYV0 355 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 ORC4O43929 436 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 TIMP1P01033 207 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 ASGR1P07306 291 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 FPGSQ05932 587 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 ALX1Q15699 326 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 RCSD1Q6JBY9 416 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 MUC3AQ02505 3323 aa17.26■□□□□ 0.35
SPG7-205ENST00000561945 ASTN1O14525 1302 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 SOWAHBA6NEL2 793 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 SLC1A4P43007 532 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
SPG7-205ENST00000561945 CNTN2Q02246 1040 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.25■□□□□ 0.35
SPG7-205ENST00000561945 SLC43A3Q8NBI5 491 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 MORC4Q8TE76 937 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 EVI5LQ96CN4 794 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 AGBL1Q96MI9 1066 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 FAM161BQ96MY7 647 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 SPC25Q9HBM1 224 aa17.25■□□□□ 0.35
SPG7-205ENST00000561945 GNEQ9Y223 722 aaKnown RBP17.25■□□□□ 0.35
SPG7-205ENST00000561945 ZMYM6O95789 1325 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 ASB14A6NK59 587 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
SPG7-205ENST00000561945 MCCP23508 829 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 MFSD5Q6N075 450 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 BTNL9Q6UXG8 535 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 FAM126BQ8IXS8 530 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 RNPC3Q96LT9 517 aaKnown RBP17.24■□□□□ 0.35
SPG7-205ENST00000561945 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 RNF146Q9NTX7 359 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 PRR12Q9ULL5 1215 aa17.24■□□□□ 0.35
SPG7-205ENST00000561945 A0A0U1RQG5 324 aaPredicted RBP17.23■□□□□ 0.35
SPG7-205ENST00000561945 TSPY2A6NKD2 308 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 ARVCFO00192 962 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 CD4P01730 458 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 SLC4A3P48751 1232 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 CTDSPL2Q05D32 466 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
SPG7-205ENST00000561945 CCDC129Q6ZRS4 1044 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 TRERF1Q96PN7 1200 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 SEZ6LQ9BYH1 1024 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 TCP11L1Q9NUJ3 509 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 CYP39A1Q9NYL5 469 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 Q9Y3F1 56 aa17.23■□□□□ 0.35
SPG7-205ENST00000561945 LOC102724159A0A0B4J2E5 919 aa17.22■□□□□ 0.35
SPG7-205ENST00000561945 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms