RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 USP17L1Q7RTZ2 530 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 GOLGA6L1Q8N7Z2 621 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 ATRIPQ8WXE1 791 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 GOLGA1Q92805 767 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 UBXN6Q9BZV1 441 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 ADAM21Q9UKJ8 722 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 NRAPQ86VF7 1730 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 COL5A3P25940 1745 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-202ENST00000561643 ZNF569Q5MCW4 686 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 WWC2Q6AWC2 1192 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 RASGRP2Q7LDG7 609 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-202ENST00000561643 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 SH3RF3Q8TEJ3 882 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-202ENST00000561643 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 PES1O00541 588 aaKnown RBP12.33□□□□□ -0.44
NEIL1-202ENST00000561643 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 UBA7P41226 1012 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 PRCPP42785 496 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 GRM4Q14833 912 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 DIXDC1Q155Q3 683 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 INF2Q27J81 1249 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 TTC31Q49AM3 519 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-202ENST00000561643 TYW1BQ6NUM6 668 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 FOXR1Q6PIV2 292 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 ACRBPQ8NEB7 543 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
NEIL1-202ENST00000561643 MYCBPQ99417 103 aaPredicted RBP12.33□□□□□ -0.44
NEIL1-202ENST00000561643 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 TULP1O00294 542 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-202ENST00000561643 GUCY2CP25092 1073 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 UBXN1Q04323 297 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 CC2D1AQ6P1N0 951 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-202ENST00000561643 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 WDR66Q8TBY9 1149 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 PLIN2Q99541 437 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 ABHD10Q9NUJ1 306 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 LRRC10BA6NIK2 292 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 RGL2O15211 777 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 BAG3O95817 575 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 KIF4BQ2VIQ3 1234 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 RSRC2Q7L4I2 434 aaKnown RBP12.32□□□□□ -0.44
NEIL1-202ENST00000561643 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 TGFBRAP1Q8WUH2 860 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 NCAPGQ9BPX3 1015 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 MAD2L2Q9UI95 211 aa12.32□□□□□ -0.44
NEIL1-202ENST00000561643 TTF2Q9UNY4 1162 aaKnown RBP12.32□□□□□ -0.44
NEIL1-202ENST00000561643 TRIM14Q14142 442 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 CCDC178Q5BJE1 867 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 TMEM60Q9H2L4 133 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 PCDHA6Q9UN73 950 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 PCDHA8Q9Y5H6 950 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 LAMB1P07942 1786 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 H3BQF6 201 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 KRT9P35527 623 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 ACTN2P35609 894 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 CYP26C1Q6V0L0 522 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 PARD6BQ9BYG5 372 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
NEIL1-202ENST00000561643 SAP30BPQ9UHR5 308 aaKnown RBP12.31□□□□□ -0.44
NEIL1-202ENST00000561643 PUF60Q9UHX1 559 aaKnown RBP12.31□□□□□ -0.44
NEIL1-202ENST00000561643 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
NEIL1-202ENST00000561643 H7C1D1 291 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 ERVK-24P63145 666 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 GSTO1P78417 241 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 STIM1Q13586 685 aa12.31□□□□□ -0.44
NEIL1-202ENST00000561643 CTAGE9A4FU28 777 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 PARP1P09874 1014 aaKnown RBP12.3□□□□□ -0.44
NEIL1-202ENST00000561643 GOLGA8HP0CJ92 632 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 TM4SF1P30408 202 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
NEIL1-202ENST00000561643 SRGAP1Q7Z6B7 1085 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 MAPKAPK5Q8IW41 473 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 ANKS1AQ92625 1134 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 ARFGAP3Q9NP61 516 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 RNF225M0QZC1 329 aaPredicted RBP12.3□□□□□ -0.44
NEIL1-202ENST00000561643 CYTH3O43739 400 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 NT5C2P49902 561 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 GALNT17Q6IS24 598 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 SLC35F6Q8N357 371 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 ZNF622Q969S3 477 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEIL1-202ENST00000561643 EXOC4Q96A65 974 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 TRIM47Q96LD4 638 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 SLF1Q9BQI6 1058 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 TMEM47Q9BQJ4 181 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 BARHL2Q9NY43 387 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 CDC23Q9UJX2 597 aa12.3□□□□□ -0.44
NEIL1-202ENST00000561643 STXBP3O00186 592 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms