RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	EPRS	P07814	1512 aa	Known RBP	5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	RAPGEF6	Q8TEU7	1601 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	LRRC10B	A6NIK2	292 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	FAM155A	B1AL88	458 aa	Predicted RBP	5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	PDPK1	O15530	556 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	MTERF2	Q49AM1	385 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	NOL9	Q5SY16	702 aa	Known RBP	5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	NOP9	Q86U38	636 aa	Known RBP	5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	DNAJB8	Q8NHS0	232 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	PI4K2B	Q8TCG2	481 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	NETO1	Q8TDF5	533 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	MICAL1	Q8TDZ2	1067 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	SMARCC1	Q92922	1105 aa	Predicted RBP	5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	TOX2	Q96NM4	488 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	KCNH3	Q9ULD8	1083 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	WDR7	Q9Y4E6	1490 aa		5.75	□□□□□ -1.49
LRRC28-222	ENST00000561431	FHOD3	Q2V2M9	1422 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	AGRP	O00253	132 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	SV2C	Q496J9	727 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	FAM181A	Q8N9Y4	354 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	PPP1R13L	Q8WUF5	828 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	RNF141	Q8WVD5	230 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	MKL1	Q969V6	931 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	APBA2	Q99767	749 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	ASPN	Q9BXN1	380 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	CCDC113	Q9H0I3	377 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	GBP3	Q9H0R5	595 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	SNTG2	Q9NY99	539 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	SUGT1	Q9Y2Z0	365 aa		5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431	NUP153	P49790	1475 aa	Known RBP	5.74	□□□□□ -1.49
LRRC28-222	ENST00000561431		B8ZZF3	427 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431		C9IYK1	514 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	EOMES	O95936	686 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	ITIH2	P19823	946 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	BUD31	P41223	144 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	RAP1GAP	P47736	663 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	SERINC3	Q13530	473 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	CLEC16A	Q2KHT3	1053 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	DCAF15	Q66K64	600 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	COX4I2	Q96KJ9	171 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	HAUS7	Q99871	368 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	PIF1	Q9H611	641 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	VAV3	Q9UKW4	847 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	TMA7	Q9Y2S6	64 aa	Known RBP	5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	PCDHB12	Q9Y5F1	795 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431		U3KQE9	123 aa		5.73	□□□□□ -1.49
LRRC28-222	ENST00000561431	ATP10B	O94823	1461 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	ARHGAP35	Q9NRY4	1499 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	ANKRD34B	A5PLL1	514 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	FAM221B	A6H8Z2	402 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	ZNF503-AS2	A6NEH8	195 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	SMARCA5	O60264	1052 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	PPM1B	O75688	479 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	TSPAN15	O95858	294 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	PRKCQ	Q04759	706 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	AUH	Q13825	339 aa	Known RBP	5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	LRP10	Q7Z4F1	713 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	PPFIBP1	Q86W92	1011 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	LRRC56	Q8IYG6	542 aa	Predicted RBP	5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	C7orf61	Q8IZ16	206 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	FLAD1	Q8NFF5	587 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	FGD4	Q96M96	766 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	DSCC1	Q9BVC3	393 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	PFDN2	Q9UHV9	154 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	KDM6B	O15054	1643 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	CFAP43	Q8NDM7	1665 aa		5.72	□□□□□ -1.49
LRRC28-222	ENST00000561431	TSPOAP1	O95153	1857 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	IQCA1L	A6NCM1	817 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	NOP56	O00567	594 aa	Known RBP	5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	SUSD5	O60279	629 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	LRRN2	O75325	713 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	EPHX1	P07099	455 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	ITGA4	P13612	1032 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	KIR3DL1	P43629	444 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	SSRP1	Q08945	709 aa	Known RBP	5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	RASGRF1	Q13972	1273 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	MLANA	Q16655	118 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	CDKAL1	Q5VV42	579 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	ZSWIM9	Q86XI8	627 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	SIAH1	Q8IUQ4	282 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	MFSD4A	Q8N468	514 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	ADCY4	Q8NFM4	1077 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	KLHL6	Q8WZ60	621 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	DNAJC7	Q99615	494 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	FAM53C	Q9NYF3	392 aa		5.71	□□□□□ -1.5
LRRC28-222	ENST00000561431	ABCA9	Q8IUA7	1624 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	MEIS1	O00470	390 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	RASA3	Q14644	834 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	NBPF9	Q3BBW0	867 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	TAF7L	Q5H9L4	462 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	MRM1	Q6IN84	353 aa	Known RBP	5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	GIMAP6	Q6P9H5	292 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	TTLL10	Q6ZVT0	673 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	BRF1	Q92994	677 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	EPN3	Q9H201	632 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	GPATCH2	Q9NW75	528 aa		5.7	□□□□□ -1.5
LRRC28-222	ENST00000561431	LMCD1	Q9NZU5	365 aa		5.7	□□□□□ -1.5

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