RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 CCDC96Q2M329 555 aa24.28■■□□□ 1.48
TPM1-232ENST00000561425 ENAHQ8N8S7 591 aaPredicted RBP24.28■■□□□ 1.48
TPM1-232ENST00000561425 DDX11Q96FC9 970 aa24.28■■□□□ 1.48
TPM1-232ENST00000561425 U3KPZ7 1027 aaPredicted RBP24.28■■□□□ 1.48
TPM1-232ENST00000561425 ICAM1P05362 532 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 ZNF865P0CJ78 1059 aaPredicted RBP24.27■■□□□ 1.48
TPM1-232ENST00000561425 CNGA1P29973 690 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 SLC16A2P36021 539 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 BMP2KLQ5H9B9 411 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 SYDE2Q5VT97 1194 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 C11orf49Q9H6J7 331 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 ACAD9Q9H845 621 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 MTMR7Q9Y216 660 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 PFASO15067 1338 aa24.27■■□□□ 1.48
TPM1-232ENST00000561425 H0YGN5 161 aa24.26■■□□□ 1.47
TPM1-232ENST00000561425 SNAI1O95863 264 aaPredicted RBP24.26■■□□□ 1.47
TPM1-232ENST00000561425 SEC23AQ15436 765 aa24.26■■□□□ 1.47
TPM1-232ENST00000561425 FAM133AQ8N9E0 248 aa24.26■■□□□ 1.47
TPM1-232ENST00000561425 TRERF1Q96PN7 1200 aa24.26■■□□□ 1.47
TPM1-232ENST00000561425 RNF146Q9NTX7 359 aa24.26■■□□□ 1.47
TPM1-232ENST00000561425 ISY1Q9ULR0 285 aaKnown RBP24.26■■□□□ 1.47
TPM1-232ENST00000561425 FRMPD2Q68DX3 1309 aaPredicted RBP24.26■■□□□ 1.47
TPM1-232ENST00000561425 SYNGAP1Q96PV0 1343 aa24.26■■□□□ 1.47
TPM1-232ENST00000561425 SLC4A3P48751 1232 aa24.25■■□□□ 1.47
TPM1-232ENST00000561425 SNAP25P60880 206 aa24.25■■□□□ 1.47
TPM1-232ENST00000561425 GPATCH4Q5T3I0 446 aaKnown RBP24.25■■□□□ 1.47
TPM1-232ENST00000561425 SKAP1Q86WV1 359 aa24.25■■□□□ 1.47
TPM1-232ENST00000561425 ANKRD35Q8N283 1001 aa24.25■■□□□ 1.47
TPM1-232ENST00000561425 PNMA1Q8ND90 353 aa24.25■■□□□ 1.47
TPM1-232ENST00000561425 GPCPD1Q9NPB8 672 aa24.25■■□□□ 1.47
TPM1-232ENST00000561425 A1CFQ9NQ94 594 aaKnown RBP24.25■■□□□ 1.47
TPM1-232ENST00000561425 TAL1P17542 331 aaPredicted RBP24.24■■□□□ 1.47
TPM1-232ENST00000561425 CCDC174Q6PII3 467 aa24.24■■□□□ 1.47
TPM1-232ENST00000561425 CYB5R4Q7L1T6 521 aa24.24■■□□□ 1.47
TPM1-232ENST00000561425 TAF6LQ9Y6J9 622 aa24.24■■□□□ 1.47
TPM1-232ENST00000561425 TNKSO95271 1327 aa24.24■■□□□ 1.47
TPM1-232ENST00000561425 DNM1LO00429 736 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 ALAS1P13196 640 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 MUM1L1Q5H9M0 696 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 ESYT1Q9BSJ8 1104 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 LSG1Q9H089 658 aaKnown RBP24.23■■□□□ 1.47
TPM1-232ENST00000561425 KAT14Q9H8E8 782 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 HOMER2Q9NSB8 354 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 PNMA2Q9UL42 364 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 NR2E3Q9Y5X4 410 aa24.23■■□□□ 1.47
TPM1-232ENST00000561425 ARRDC4Q8NCT1 418 aa24.22■■□□□ 1.47
TPM1-232ENST00000561425 CCPG1Q9ULG6 757 aa24.22■■□□□ 1.47
TPM1-232ENST00000561425 WDR19Q8NEZ3 1342 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 SOWAHBA6NEL2 793 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 E7EWF7 191 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 EVI5O60447 810 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 STOX1Q6ZVD7 989 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 UBAC1Q9BSL1 405 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 KATNBL1Q9H079 304 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 CYP39A1Q9NYL5 469 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 RBM8AQ9Y5S9 174 aaKnown RBP24.21■■□□□ 1.47
TPM1-232ENST00000561425 PLXNA1Q9UIW2 1896 aa24.21■■□□□ 1.47
TPM1-232ENST00000561425 GOLGA8HP0CJ92 632 aa24.2■■□□□ 1.46
TPM1-232ENST00000561425 CNTN2Q02246 1040 aa24.2■■□□□ 1.46
TPM1-232ENST00000561425 TRDNQ13061 729 aa24.2■■□□□ 1.46
TPM1-232ENST00000561425 ASPRV1Q53RT3 343 aa24.2■■□□□ 1.46
TPM1-232ENST00000561425 CLEC4DQ8WXI8 215 aa24.2■■□□□ 1.46
TPM1-232ENST00000561425 CNPY2Q9Y2B0 182 aa24.2■■□□□ 1.46
TPM1-232ENST00000561425 FRMPD3Q5JV73 1810 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 ASTN1O14525 1302 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 POTEB2H3BUK9 544 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 AKR1A1P14550 325 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 NCOA7Q8NI08 942 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 PRO3102Q9H379 93 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 ABHD16BQ9H3Z7 469 aa24.19■■□□□ 1.46
TPM1-232ENST00000561425 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.19■■□□□ 1.46
TPM1-232ENST00000561425 ACVR2BQ13705 512 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 NECTIN1Q15223 517 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 LRRC41Q15345 812 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 IFIT1BQ5T764 474 aaKnown RBP24.18■■□□□ 1.46
TPM1-232ENST00000561425 ANO1Q5XXA6 986 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 ARMCX2Q7L311 632 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 MORC4Q8TE76 937 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 UBA5Q9GZZ9 404 aa24.18■■□□□ 1.46
TPM1-232ENST00000561425 GJC2Q5T442 439 aaPredicted RBP24.17■■□□□ 1.46
TPM1-232ENST00000561425 KIAA1211Q6ZU35 1233 aa24.17■■□□□ 1.46
TPM1-232ENST00000561425 CCDC144CPQ8IYA2 1237 aa24.17■■□□□ 1.46
TPM1-232ENST00000561425 MB21D2Q8IYB1 491 aaPredicted RBP24.17■■□□□ 1.46
TPM1-232ENST00000561425 CCDC136Q96JN2 1154 aa24.17■■□□□ 1.46
TPM1-232ENST00000561425 MAF1Q9H063 256 aa24.17■■□□□ 1.46
TPM1-232ENST00000561425 FAM184BQ9ULE4 1060 aa24.17■■□□□ 1.46
TPM1-232ENST00000561425 ALPK3Q96L96 1907 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 NFIBO00712 420 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 PARP1P09874 1014 aaKnown RBP24.16■■□□□ 1.46
TPM1-232ENST00000561425 RARBP10826 455 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 LRRC26Q2I0M4 334 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 ADGRF4Q8IZF3 695 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 RGS22Q8NE09 1264 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 IGDCC4Q8TDY8 1250 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 MTA3Q9BTC8 594 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 SENP6Q9GZR1 1112 aaPredicted RBP24.16■■□□□ 1.46
TPM1-232ENST00000561425 CPVLQ9H3G5 476 aa24.16■■□□□ 1.46
TPM1-232ENST00000561425 COLQQ9Y215 455 aaPredicted RBP24.16■■□□□ 1.46
TPM1-232ENST00000561425 LOC102724159A0A0B4J2E5 919 aa24.15■■□□□ 1.46
TPM1-232ENST00000561425 PALM3A6NDB9 673 aaPredicted RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms