RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 UPF3AQ9H1J1 476 aaKnown RBP16.87■□□□□ 0.29
PRKXP1-201ENST00000561423 ABHD16BQ9H3Z7 469 aa16.87■□□□□ 0.29
PRKXP1-201ENST00000561423 HOMER2Q9NSB8 354 aa16.87■□□□□ 0.29
PRKXP1-201ENST00000561423 FBXO40Q9UH90 709 aa16.87■□□□□ 0.29
PRKXP1-201ENST00000561423 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
PRKXP1-201ENST00000561423 CDH23Q9H251 3354 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 CTAGE5O15320 804 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 TIMP1P01033 207 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 ASGR1P07306 291 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 BMP3P12645 472 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 DNAJB2P25686 324 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 GJA9P57773 515 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 CNTN2Q02246 1040 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 NEDD1Q8NHV4 660 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 ZNF287Q9HBT7 754 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 ELP1O95163 1332 aa16.86■□□□□ 0.29
PRKXP1-201ENST00000561423 TMEM232C9JQI7 657 aa16.85■□□□□ 0.29
PRKXP1-201ENST00000561423 TSPY3P0CV98 308 aa16.85■□□□□ 0.29
PRKXP1-201ENST00000561423 TSPY8P0CW00 308 aa16.85■□□□□ 0.29
PRKXP1-201ENST00000561423 GRIN2CQ14957 1233 aa16.85■□□□□ 0.29
PRKXP1-201ENST00000561423 MFSD5Q6N075 450 aa16.85■□□□□ 0.29
PRKXP1-201ENST00000561423 PCSK9Q8NBP7 692 aaKnown RBP16.85■□□□□ 0.29
PRKXP1-201ENST00000561423 SPTBN5Q9NRC6 3674 aaKnown RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 ARVCFO00192 962 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 C16orf59Q7L2K0 433 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 FAM126BQ8IXS8 530 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 PI4K2BQ8TCG2 481 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 ACAD9Q9H845 621 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 SPC25Q9HBM1 224 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 A1CFQ9NQ94 594 aaKnown RBP16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 ZNF536O15090 1300 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 MROH7Q68CQ1 1323 aa16.84■□□□□ 0.29
PRKXP1-201ENST00000561423 SOWAHBA6NEL2 793 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 ASTN1O14525 1302 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 VCANP13611 3396 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 STAT2P52630 851 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 NKX3-2P78367 333 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 BEX3Q00994 111 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 TFAP4Q01664 338 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 PPARAQ07869 468 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 GNASQ5JWF2 1037 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 TMEM240Q5SV17 173 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 USP38Q8NB14 1042 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 VTI1AQ96AJ9 217 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 GMCL1Q96IK5 515 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 NAPBQ9H115 298 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 RNF146Q9NTX7 359 aa16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 ISY1Q9ULR0 285 aaKnown RBP16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 DDX49Q9Y6V7 483 aaKnown RBP16.83■□□□□ 0.28
PRKXP1-201ENST00000561423 TTC41PQ6P2S7 1318 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 FOXP2O15409 715 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 FDX1P10109 184 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 CSF2RAP15509 400 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 PTGS1P23219 599 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 PDE4BQ07343 736 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 PPIGQ13427 754 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 ZMYM1Q5SVZ6 1142 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 RASIP1Q5U651 963 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 RASGRP2Q7LDG7 609 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 TIFAQ96CG3 184 aa16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRKXP1-201ENST00000561423 GRXCR1A8MXD5 290 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 ACRP10323 421 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 MCCP23508 829 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 PBX2P40425 430 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 SLC1A4P43007 532 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 SNAP25P60880 206 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 TNFAIP2Q03169 654 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 STAG1Q8WVM7 1258 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 PBX4Q9BYU1 374 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 ZNF576Q9H609 170 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 GNEQ9Y223 722 aaKnown RBP16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 PRUNE2Q8WUY3 3088 aa16.81■□□□□ 0.28
PRKXP1-201ENST00000561423 MYH4Q9Y623 1939 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 CD4P01730 458 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 ALAS1P13196 640 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 IKQ13123 557 aaPredicted RBP16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 KCTD1Q719H9 257 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 TMEM199Q8N511 208 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 CHURC1Q8WUH1 139 aa16.8■□□□□ 0.28
PRKXP1-201ENST00000561423 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 549.8 ms