RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
HERC1-212ENST00000561348 ADAMTS5Q9UNA0 930 aa11.84□□□□□ -0.51
HERC1-212ENST00000561348 KIAA0100Q14667 2235 aaKnown RBP11.83□□□□□ -0.52
HERC1-212ENST00000561348 COBLO75128 1261 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 MCM5P33992 734 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 NSMFQ6X4W1 530 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 REPS2Q8NFH8 660 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 TRERF1Q96PN7 1200 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 MYL10Q9BUA6 226 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.52
HERC1-212ENST00000561348 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
HERC1-212ENST00000561348 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 FLRT1Q9NZU1 646 aa11.83□□□□□ -0.52
HERC1-212ENST00000561348 CCDC69A6NI79 296 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 REC8O95072 547 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 FDX1P10109 184 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 XRCC5P13010 732 aaKnown RBP11.82□□□□□ -0.52
HERC1-212ENST00000561348 CCND3P30281 292 aaPredicted RBP11.82□□□□□ -0.52
HERC1-212ENST00000561348 COPB2P35606 906 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 CACNB2Q08289 660 aaPredicted RBP11.82□□□□□ -0.52
HERC1-212ENST00000561348 NECTIN1Q15223 517 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 PRAMEF19Q5SWL8 479 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 GPATCH4Q5T3I0 446 aaKnown RBP11.82□□□□□ -0.52
HERC1-212ENST00000561348 ANO1Q5XXA6 986 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 HOMER1Q86YM7 354 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 CCDC144CPQ8IYA2 1237 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 TRMT44Q8IYL2 757 aaKnown RBP11.82□□□□□ -0.52
HERC1-212ENST00000561348 USP6NLQ92738 828 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 A0A0G2JMZ2 1700 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
HERC1-212ENST00000561348 ZNFX1Q9P2E3 1918 aaKnown RBP11.82□□□□□ -0.52
HERC1-212ENST00000561348 RXRAP19793 462 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 NOVP48745 357 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 NT5C2P49902 561 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 ANTXR2P58335 489 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
HERC1-212ENST00000561348 SEC23AQ15436 765 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 ASPRV1Q53RT3 343 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 MUM1L1Q5H9M0 696 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 MB21D2Q8IYB1 491 aaPredicted RBP11.81□□□□□ -0.52
HERC1-212ENST00000561348 STAG2Q8N3U4 1231 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 U2AF1L4Q8WU68 220 aaKnown RBP11.81□□□□□ -0.52
HERC1-212ENST00000561348 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 FBXO40Q9UH90 709 aa11.81□□□□□ -0.52
HERC1-212ENST00000561348 PTPDC1A2A3K4 754 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 KLRF2D3W0D1 207 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 ICAM1P05362 532 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 GJB1P08034 283 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 CPA1P15085 419 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 OAZ1P54368 228 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 COL9A3Q14050 684 aaPredicted RBP11.8□□□□□ -0.52
HERC1-212ENST00000561348 CDC37Q16543 378 aaPredicted RBP11.8□□□□□ -0.52
HERC1-212ENST00000561348 RASEFQ8IZ41 740 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 ADGRF4Q8IZF3 695 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 ANKS1AQ92625 1134 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 MAML3Q96JK9 1138 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 JAKMIP1Q96N16 626 aaKnown RBP11.8□□□□□ -0.52
HERC1-212ENST00000561348 ZNF536O15090 1300 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 CENPFP49454 3210 aa11.8□□□□□ -0.52
HERC1-212ENST00000561348 ATP2A1O14983 1001 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 PLA2G6O60733 806 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 SGPL1O95470 568 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 SNHG28P0DPA3 235 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 CALML3P27482 149 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 CNTN2Q02246 1040 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 BTNL9Q6UXG8 535 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 SYNE3Q6ZMZ3 975 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 ZNF654Q8IZM8 581 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 CCDC82Q8N4S0 544 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 CTCFLQ8NI51 663 aaPredicted RBP11.79□□□□□ -0.52
HERC1-212ENST00000561348 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
HERC1-212ENST00000561348 ZHX1Q9UKY1 873 aaPredicted RBP11.79□□□□□ -0.52
HERC1-212ENST00000561348 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 HTTP42858 3142 aa11.79□□□□□ -0.52
HERC1-212ENST00000561348 NFIBO00712 420 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
HERC1-212ENST00000561348 HOXC6P09630 235 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 GJA8P48165 433 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
HERC1-212ENST00000561348 KRT32Q14532 448 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 QRICH1Q2TAL8 776 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 TKFCQ3LXA3 575 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 NOL8Q76FK4 1167 aaKnown RBP11.78□□□□□ -0.52
HERC1-212ENST00000561348 EEPD1Q7L9B9 569 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
HERC1-212ENST00000561348 IGDCC4Q8TDY8 1250 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 TMEM87BQ96K49 555 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
HERC1-212ENST00000561348 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
HERC1-212ENST00000561348 A1CFQ9NQ94 594 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms