RNA–Protein interactions for RNA: ENST00000560865.1

AC108449.2-201, humanhuman

TSL 3 BASIC

Gene AC108449.2, Length 552 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108449.2-201ENST00000560865 GARTP22102 1010 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 RPL6Q02878 288 aaKnown RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 EXOSC9Q06265 439 aaKnown RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 SOX4Q06945 474 aaPredicted RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 OS9Q13438 667 aaPredicted RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 RAB3GAP1Q15042 981 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 RABEP1Q15276 862 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 FBXL19Q6PCT2 694 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 CHD1LQ86WJ1 897 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 ITPRIPQ8IWB1 547 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 C12orf50Q8NA57 414 aaPredicted RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 ZNF296Q8WUU4 475 aaPredicted RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 C8orf48Q96LL4 319 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 SLKQ9H2G2 1235 aaPredicted RBP8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 LMTK3Q96Q04 1460 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
AC108449.2-201ENST00000560865 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 TULP4Q9NRJ4 1543 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 CCDC189A1A4V9 331 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 TMPRSS2O15393 492 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 RRP9O43818 475 aaKnown RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 GAS2O43903 313 aaKnown RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 F13A1P00488 732 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 TPM2P07951 284 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 HSP90AB1P08238 724 aaKnown RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 XRCC6P12956 609 aaKnown RBP eCLIP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 RIPK4P57078 832 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 ERVK-24P63145 666 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 PTPN11Q06124 597 aaPredicted RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 CCDC173Q0VFZ6 552 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 MPP2Q14168 576 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 PLEKHG4Q58EX7 1191 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 ZC3H12AQ5D1E8 599 aaKnown RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 ODR4Q5SWX8 454 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 BNC2Q6ZN30 1099 aaPredicted RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 FAM196AQ6ZSG2 479 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 HDXQ7Z353 690 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 JARID2Q92833 1246 aaPredicted RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 ELMO3Q96BJ8 720 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 LRRC3Q9BY71 257 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 ATXN3LQ9H3M9 355 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 GRPEL1Q9HAV7 217 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 TYW1Q9NV66 732 aaKnown RBP8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 CRIM1Q9NZV1 1036 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 POGKQ9P215 609 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 SNCAIPQ9Y6H5 919 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 CD109Q6YHK3 1445 aa8.35□□□□□ -1.07
AC108449.2-201ENST00000560865 FAM221AA4D161 298 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 GREM1O60565 184 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 CILPO75339 1184 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 CDC45O75419 566 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 MCM5P33992 734 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 GATA4P43694 442 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 PREPP48147 710 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 MCM2P49736 904 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 GYS2P54840 703 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 UBE4AQ14139 1066 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 WIPI1Q5MNZ9 446 aaPredicted RBP8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 RPAP2Q8IXW5 612 aaPredicted RBP8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 CKAP2LQ8IYA6 745 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 FAM46AQ96IP4 442 aaKnown RBP8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 NT5C1AQ9BXI3 368 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 TMX1Q9H3N1 280 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 HIF3AQ9Y2N7 669 aa8.34□□□□□ -1.07
AC108449.2-201ENST00000560865 ARHGEF40Q8TER5 1519 aa8.34□□□□□ -1.08
AC108449.2-201ENST00000560865 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 HSP90AA1P07900 732 aaKnown RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 FGRP09769 529 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 EVA1CP58658 441 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 KLHL40Q2TBA0 621 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 PLA2G4EQ3MJ16 856 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 MAP9Q49MG5 647 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 LRFN4Q6PJG9 635 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 FAM43BQ6ZT52 329 aaPredicted RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 MTERF4Q7Z6M4 381 aaKnown RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 SKAP1Q86WV1 359 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 C2CD4AQ8NCU7 369 aaPredicted RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 MKL1Q969V6 931 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 PLPPR2Q96GM1 343 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 MEGF10Q96KG7 1140 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 MAP7D2Q96T17 732 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 IER2Q9BTL4 223 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 YIPF2Q9BWQ6 316 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 GSX1Q9H4S2 264 aaPredicted RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 PPP1R9AQ9ULJ8 1098 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 TACC3Q9Y6A5 838 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 A0A1W2PP64 1363 aa8.33□□□□□ -1.08
AC108449.2-201ENST00000560865 FAM135BQ49AJ0 1406 aa8.32□□□□□ -1.08
AC108449.2-201ENST00000560865 KIF20BQ96Q89 1820 aa8.32□□□□□ -1.08
AC108449.2-201ENST00000560865 FYB1O15117 783 aa8.32□□□□□ -1.08
AC108449.2-201ENST00000560865 DRD2P14416 443 aa8.32□□□□□ -1.08
AC108449.2-201ENST00000560865 APOBRQ0VD83 1088 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms