RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PAK6Q9NQU5 681 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 CTDP1Q9Y5B0 961 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-213ENST00000560856 PRC1O43663 620 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 PGK2P07205 417 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 TAL1P17542 331 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 TROAPQ12815 778 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 WTAPQ15007 396 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 ZNF792Q3KQV3 632 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 ADCK5Q3MIX3 580 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 ASPRV1Q53RT3 343 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 TMEM67Q5HYA8 995 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 RNF20Q5VTR2 975 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 OLFML2BQ68BL8 750 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 CCDC174Q6PII3 467 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 STAG2Q8N3U4 1231 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 SHISA4Q96DD7 197 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 UBA5Q9GZZ9 404 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 LY9Q9HBG7 655 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 RPTORQ8N122 1335 aa17.87■□□□□ 0.45
SNRPA1-213ENST00000560856 PALM3A6NDB9 673 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 ICAM1P05362 532 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 PARP1P09874 1014 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 MCM5P33992 734 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 HSPA4P34932 840 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 GJA8P48165 433 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 KCTD2Q14681 263 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 SLC35G1Q2M3R5 365 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 TKFCQ3LXA3 575 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 MAML3Q96JK9 1138 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 MAD2L2Q9UI95 211 aa17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 DIS3Q9Y2L1 958 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-213ENST00000560856 SH2B2O14492 632 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 CYP2C19P33261 490 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 MKI67P46013 3256 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 GRM4Q14833 912 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 SART3Q15020 963 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 MUM1L1Q5H9M0 696 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 TRPV1Q8NER1 839 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 TMEM87BQ96K49 555 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 FGD4Q96M96 766 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 HMX1Q9NP08 348 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 RNF146Q9NTX7 359 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 FBXO40Q9UH90 709 aa17.85■□□□□ 0.45
SNRPA1-213ENST00000560856 ERICH2A1L162 156 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 EPB41L2O43491 1005 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 REC8O95072 547 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 SGPL1O95470 568 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 ALAS1P13196 640 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 LIFRP42702 1097 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 MFSD14CQ5VZR4 134 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 ADGRF4Q8IZF3 695 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 U2AF1L4Q8WU68 220 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 MTMR8Q96EF0 704 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 NEK1Q96PY6 1258 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 CRISPLD2Q9H0B8 497 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 ACAD9Q9H845 621 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 JMJD4Q9H9V9 463 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 A1CFQ9NQ94 594 aaKnown RBP17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 HOMER2Q9NSB8 354 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 SLC5A4Q9NY91 659 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 CCPG1Q9ULG6 757 aa17.84■□□□□ 0.45
SNRPA1-213ENST00000560856 WDR19Q8NEZ3 1342 aa17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 CCND3P30281 292 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 CLEC4DQ8WXI8 215 aa17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 DEFB118Q96PH6 123 aa17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 USP26Q9BXU7 913 aa17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 LRRC2Q9BYS8 371 aa17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 SNX14Q9Y5W7 946 aa17.83■□□□□ 0.44
SNRPA1-213ENST00000560856 KLRF2D3W0D1 207 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 CYBAP13498 195 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 UBE2Q1Q7Z7E8 422 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 ZNF654Q8IZM8 581 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 FAM133AQ8N9E0 248 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 DDX11Q96FC9 970 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 MAP3K14Q99558 947 aa17.82■□□□□ 0.44
SNRPA1-213ENST00000560856 CNTN2Q02246 1040 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 MLLT1Q03111 559 aaPredicted RBP17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 KRT32Q14532 448 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 CDC37Q16543 378 aaPredicted RBP17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 LHX8Q68G74 356 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 MAMDC4Q6UXC1 1216 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 SGMS1Q86VZ5 419 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 ANKRD35Q8N283 1001 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 TMTC2Q8N394 836 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 TCEANC2Q96MN5 208 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 TINF2Q9BSI4 451 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 MYL10Q9BUA6 226 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 RIOX1Q9H6W3 641 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 PLXNA1Q9UIW2 1896 aa17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 BAZ2BQ9UIF8 2168 aaKnown RBP17.81■□□□□ 0.44
SNRPA1-213ENST00000560856 SOWAHBA6NEL2 793 aa17.8■□□□□ 0.44
SNRPA1-213ENST00000560856 NFIBO00712 420 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms