RNA–Protein interactions for RNA: ENST00000560853.5

LINC00593-202, long intergenic non-protein coding RNA 593, humanhuman

TSL 1 (best) BASIC

Gene LINC00593, Length 1,483 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-202ENST00000560853 AKNAD1Q5T1N1 836 aa17.7■□□□□ 0.42
LINC00593-202ENST00000560853 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
LINC00593-202ENST00000560853 TBC1D10CQ8IV04 446 aa17.7■□□□□ 0.42
LINC00593-202ENST00000560853 MSL3Q8N5Y2 521 aaKnown RBP17.7■□□□□ 0.42
LINC00593-202ENST00000560853 PRR12Q9ULL5 1215 aa17.7■□□□□ 0.42
LINC00593-202ENST00000560853 ZNF536O15090 1300 aa17.7■□□□□ 0.42
LINC00593-202ENST00000560853 SYNGAP1Q96PV0 1343 aa17.7■□□□□ 0.42
LINC00593-202ENST00000560853 PGK1P00558 417 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 TOP1P11387 765 aaKnown RBP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 AKR1A1P14550 325 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 BMP8BP34820 402 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ADCYAP1R1P41586 468 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 RTP1P59025 263 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 MAMDC4Q6UXC1 1216 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 DCAF4Q8WV16 495 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 FERMT2Q96AC1 680 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ACAD9Q9H845 621 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 RNF146Q9NTX7 359 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 TCP11L1Q9NUJ3 509 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ATP11BQ9Y2G3 1177 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 HIP1O00291 1037 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ZNF213O14771 459 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 SNAI1O95863 264 aaPredicted RBP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ALAS1P13196 640 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
LINC00593-202ENST00000560853 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 RNF41Q9H4P4 317 aaPredicted RBP17.69■□□□□ 0.42
LINC00593-202ENST00000560853 MCM3APO60318 1980 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 PCP11498 1178 aaKnown RBP17.68■□□□□ 0.42
LINC00593-202ENST00000560853 SLC16A2P36021 539 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 MDM2Q00987 491 aaPredicted RBP17.68■□□□□ 0.42
LINC00593-202ENST00000560853 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 SLC39A5Q6ZMH5 540 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 RNF180Q86T96 592 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 FGD4Q96M96 766 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 TRERF1Q96PN7 1200 aa17.68■□□□□ 0.42
LINC00593-202ENST00000560853 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.68■□□□□ 0.42
LINC00593-202ENST00000560853 FRMPD2Q68DX3 1309 aaPredicted RBP17.68■□□□□ 0.42
LINC00593-202ENST00000560853 POTEB2H3BUK9 544 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 PDE4AP27815 886 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 CNTN2Q02246 1040 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 TKFCQ3LXA3 575 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 UBE2OQ9C0C9 1292 aaKnown RBP17.67■□□□□ 0.42
LINC00593-202ENST00000560853 GPCPD1Q9NPB8 672 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 A1CFQ9NQ94 594 aaKnown RBP17.67■□□□□ 0.42
LINC00593-202ENST00000560853 FAM184BQ9ULE4 1060 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 NEDD4P46934 1319 aa17.67■□□□□ 0.42
LINC00593-202ENST00000560853 SOX1O00570 391 aaPredicted RBP17.66■□□□□ 0.42
LINC00593-202ENST00000560853 ACVR2BQ13705 512 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 TRIM60Q495X7 471 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 SYDE2Q5VT97 1194 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 ARMCX2Q7L311 632 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 ESR2Q92731 530 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 ZKSCAN3Q9BRR0 538 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
LINC00593-202ENST00000560853 PDHBP11177 359 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 MUM1L1Q5H9M0 696 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 FAM133AQ8N9E0 248 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 LRCH3Q96II8 777 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 TTC14Q96N46 770 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 LBHD1Q9BQE6 289 aaPredicted RBP17.65■□□□□ 0.42
LINC00593-202ENST00000560853 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
LINC00593-202ENST00000560853 ABHD16BQ9H3Z7 469 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 SYNRGQ9UMZ2 1314 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
LINC00593-202ENST00000560853 LAMA4Q16363 1823 aa17.65■□□□□ 0.42
LINC00593-202ENST00000560853 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
LINC00593-202ENST00000560853 ICAM1P05362 532 aa17.64■□□□□ 0.41
LINC00593-202ENST00000560853 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
LINC00593-202ENST00000560853 TDHQ8IZJ6 230 aa17.64■□□□□ 0.41
LINC00593-202ENST00000560853 DSCC1Q9BVC3 393 aa17.64■□□□□ 0.41
LINC00593-202ENST00000560853 PRDM5Q9NQX1 630 aaPredicted RBP17.64■□□□□ 0.41
LINC00593-202ENST00000560853 SOWAHBA6NEL2 793 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 KDM4AO75164 1064 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 GSPT1P15170 499 aaKnown RBP17.63■□□□□ 0.41
LINC00593-202ENST00000560853 SNX17Q15036 470 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 IMMTQ16891 758 aaKnown RBP17.63■□□□□ 0.41
LINC00593-202ENST00000560853 CCDC144BQ3MJ40 725 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 TTC22Q5TAA0 569 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 A0A1W2PQ45 241 aaPredicted RBP17.63■□□□□ 0.41
LINC00593-202ENST00000560853 A0A1W2PQY0 241 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 B4E1Z4 1266 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 ADCY6O43306 1168 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 DUSP11O75319 330 aaKnown RBP17.63■□□□□ 0.41
LINC00593-202ENST00000560853 ZNF543Q08ER8 600 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 IQCA1Q86XH1 822 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 IL25Q9H293 177 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 CTNNA3Q9UI47 895 aa17.63■□□□□ 0.41
LINC00593-202ENST00000560853 MYADML2A6NDP7 307 aa17.62■□□□□ 0.41
LINC00593-202ENST00000560853 ASB14A6NK59 587 aa17.62■□□□□ 0.41
LINC00593-202ENST00000560853 C6orf222P0C671 652 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms