RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 UPF3AQ9H1J1 476 aaKnown RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 C11orf16Q9NQ32 467 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 ZBTB40Q9NUA8 1239 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 TNNQ9UQP3 1299 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 PRRC2BQ5JSZ5 2229 aaKnown RBP11.17□□□□□ -0.62
SMAD3-215ENST00000560424 MYH8P13535 1937 aa11.17□□□□□ -0.62
SMAD3-215ENST00000560424 UMODL1Q5DID0 1318 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 ALADP13716 330 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-215ENST00000560424 BEX3Q00994 111 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 GABPAQ06546 454 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 ITGA7Q13683 1181 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 KRT40Q6A162 431 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 CXCL17Q6UXB2 119 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 MAMDC4Q6UXC1 1216 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 ZNF467Q7Z7K2 595 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-215ENST00000560424 CLEC10AQ8IUN9 316 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 KHSRPQ92945 711 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMAD3-215ENST00000560424 SCLYQ96I15 445 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 SLC9A7Q96T83 725 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 AP5M1Q9H0R1 490 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 FBXO28Q9NVF7 368 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
SMAD3-215ENST00000560424 ADAMTS5Q9UNA0 930 aa11.16□□□□□ -0.62
SMAD3-215ENST00000560424 PARP14Q460N5 1801 aa11.15□□□□□ -0.62
SMAD3-215ENST00000560424 PNMA6EA0A0J9YXQ4 647 aa11.15□□□□□ -0.62
SMAD3-215ENST00000560424 FAM83BQ5T0W9 1011 aa11.15□□□□□ -0.62
SMAD3-215ENST00000560424 CENPQQ7L2Z9 268 aaPredicted RBP11.15□□□□□ -0.62
SMAD3-215ENST00000560424 DEFB128Q7Z7B8 93 aa11.15□□□□□ -0.62
SMAD3-215ENST00000560424 ITPRIPQ8IWB1 547 aa11.15□□□□□ -0.62
SMAD3-215ENST00000560424 NOC4LQ9BVI4 516 aaKnown RBP11.15□□□□□ -0.62
SMAD3-215ENST00000560424 SUPT20HL2P0C7V6 817 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 AKR1B1P15121 316 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 NHLH1Q02575 133 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 TNFAIP2Q03169 654 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 ARMCX2Q7L311 632 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 TLK2Q86UE8 772 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 CPXCR1Q8N123 301 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 GJD3Q8N144 294 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 SLF1Q9BQI6 1058 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 RIOK1Q9BRS2 568 aaKnown RBP11.14□□□□□ -0.63
SMAD3-215ENST00000560424 TRPV6Q9H1D0 765 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 WNT8AQ9H1J5 351 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 KCNH6Q9H252 994 aa11.14□□□□□ -0.63
SMAD3-215ENST00000560424 ZNF536O15090 1300 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 CHD9Q3L8U1 2897 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 ADCY6O43306 1168 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 B4GALT4O60513 344 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 ZBED4O75132 1171 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 SURF6O75683 361 aaKnown RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 EEF2P13639 858 aaKnown RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 GRB10Q13322 594 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 HDAC1Q13547 482 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 TTLL4Q14679 1199 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 FSCN1Q16658 493 aaKnown RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 PHOSPHO2Q8TCD6 241 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 SDR42E1Q8WUS8 393 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 DYNLL2Q96FJ2 89 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 FTOQ9C0B1 505 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 FBXO40Q9UH90 709 aa11.13□□□□□ -0.63
SMAD3-215ENST00000560424 DBNLQ9UJU6 430 aaKnown RBP11.13□□□□□ -0.63
SMAD3-215ENST00000560424 DNAJC25-GNG10A0A024R161 153 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 EPOPA6NHQ4 379 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 KCNJ6P48051 423 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 TAP1Q03518 808 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 EVX2Q03828 476 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 SLC9C2Q5TAH2 1124 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 CCDC144CPQ8IYA2 1237 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 SLC43A3Q8NBI5 491 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 FBXL18Q96ME1 805 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 ANTXR1Q9H6X2 564 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 DCP1AQ9NPI6 582 aaPredicted RBP11.12□□□□□ -0.63
SMAD3-215ENST00000560424 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 CHD7Q9P2D1 2997 aa11.12□□□□□ -0.63
SMAD3-215ENST00000560424 DYNC1LI2O43237 492 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-215ENST00000560424 CYP2D6P10635 497 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 RFC2P35250 354 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 PSMC6P62333 389 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 SIAH1Q8IUQ4 282 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 PRPF38AQ8NAV1 312 aaKnown RBP11.11□□□□□ -0.63
SMAD3-215ENST00000560424 RETREG2Q8NC44 543 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 REPS2Q8NFH8 660 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 UBE2ZQ9H832 354 aaPredicted RBP11.11□□□□□ -0.63
SMAD3-215ENST00000560424 CD320Q9NPF0 282 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
SMAD3-215ENST00000560424 RIPK3Q9Y572 518 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
SMAD3-215ENST00000560424 MCM3APO60318 1980 aa11.1□□□□□ -0.63
SMAD3-215ENST00000560424 REV3LO60673 3130 aa11.1□□□□□ -0.63
SMAD3-215ENST00000560424 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms