RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 A0A0G2JLL6 359 aaPredicted RBP14.01□□□□□ -0.17
HERC1-205ENST00000559886 KIF3CO14782 793 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 SNAP25P60880 206 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 PPP1R18Q6NYC8 613 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 PRRT2Q7Z6L0 340 aaPredicted RBP14.01□□□□□ -0.17
HERC1-205ENST00000559886 NOSTRINQ8IVI9 506 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 DAGLBQ8NCG7 672 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 AMNQ9BXJ7 453 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 PCDHA4Q9UN74 947 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 FLOT1O75955 427 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 MCM4P33991 863 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 NR5A1Q13285 461 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
HERC1-205ENST00000559886 COL11A1P12107 1806 aaPredicted RBP14□□□□□ -0.17
HERC1-205ENST00000559886 SMCO2A6NFE2 343 aa14□□□□□ -0.17
HERC1-205ENST00000559886 FBXO11Q86XK2 927 aa14□□□□□ -0.17
HERC1-205ENST00000559886 BLIDQ8IZY5 108 aa14□□□□□ -0.17
HERC1-205ENST00000559886 PROCA1Q8NCQ7 364 aaPredicted RBP14□□□□□ -0.17
HERC1-205ENST00000559886 TNFRSF25Q93038 417 aa14□□□□□ -0.17
HERC1-205ENST00000559886 PCDHA1Q9Y5I3 950 aa14□□□□□ -0.17
HERC1-205ENST00000559886 M0R2N6 131 aa14□□□□□ -0.17
HERC1-205ENST00000559886 ADAMTS3O15072 1205 aa14□□□□□ -0.17
HERC1-205ENST00000559886 GNA11P29992 359 aa14□□□□□ -0.17
HERC1-205ENST00000559886 GJA5P36382 358 aa14□□□□□ -0.17
HERC1-205ENST00000559886 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
HERC1-205ENST00000559886 ATL3Q6DD88 541 aa14□□□□□ -0.17
HERC1-205ENST00000559886 CATSPERGQ6ZRH7 1159 aa14□□□□□ -0.17
HERC1-205ENST00000559886 C6orf50Q9HD87 102 aa14□□□□□ -0.17
HERC1-205ENST00000559886 PASKQ96RG2 1323 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L15C9J2P7 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L13C9JLJ4 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L11C9JVI0 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L18D6R9N7 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L22D6RA61 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L17D6RBQ6 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L19D6RCP7 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 KRT85P78386 507 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 TRAF1Q13077 416 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 CNPY2Q9Y2B0 182 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 FDX1P10109 184 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 SAMD1Q6SPF0 538 aaPredicted RBP13.99□□□□□ -0.17
HERC1-205ENST00000559886 ZNF396Q96N95 335 aaPredicted RBP13.99□□□□□ -0.17
HERC1-205ENST00000559886 SLC38A10Q9HBR0 1119 aa13.99□□□□□ -0.17
HERC1-205ENST00000559886 GOLGA6L22H0YM25 854 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 COG2Q14746 738 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 TREML2Q5T2D2 321 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 BICD2Q8TD16 824 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 WNK4Q96J92 1243 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 RIC8AQ9NPQ8 531 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 TFIP11Q9UBB9 837 aaKnown RBP13.98□□□□□ -0.17
HERC1-205ENST00000559886 CFAP45Q9UL16 551 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 ADAMTS5Q9UNA0 930 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 MYPNQ86TC9 1320 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
HERC1-205ENST00000559886 HOXA7P31268 230 aaPredicted RBP13.98□□□□□ -0.17
HERC1-205ENST00000559886 DSG3P32926 999 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 ADCY7P51828 1080 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 MOGSQ13724 837 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 CCDC174Q6PII3 467 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 GADL1Q6ZQY3 521 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 PCDHA6Q9UN73 950 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 PCDHA8Q9Y5H6 950 aa13.98□□□□□ -0.17
HERC1-205ENST00000559886 ZNF536O15090 1300 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 VWA5AO00534 786 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 USH1GQ495M9 461 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 EARS2Q5JPH6 523 aaKnown RBP13.97□□□□□ -0.17
HERC1-205ENST00000559886 FASTKD5Q7L8L6 764 aaKnown RBP13.97□□□□□ -0.17
HERC1-205ENST00000559886 CUL5Q93034 780 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 SCAND2PQ9GZW5 306 aaPredicted RBP13.97□□□□□ -0.17
HERC1-205ENST00000559886 GLT8D2Q9H1C3 349 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 HOXC10Q9NYD6 342 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 ICAM1P05362 532 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 MRPL12P52815 198 aaKnown RBP13.97□□□□□ -0.17
HERC1-205ENST00000559886 NOM1Q5C9Z4 860 aaKnown RBP13.97□□□□□ -0.17
HERC1-205ENST00000559886 RILPL1Q5EBL4 403 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 TMEM87AQ8NBN3 555 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 RASGRP4Q8TDF6 673 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 ATG4CQ96DT6 458 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 PSTPIP2Q9H939 334 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 GDPD2Q9HCC8 539 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 AGTPBP1Q9UPW5 1226 aa13.97□□□□□ -0.17
HERC1-205ENST00000559886 FAM205CA6NFA0 338 aa13.96□□□□□ -0.17
HERC1-205ENST00000559886 FIBPO43427 364 aa13.96□□□□□ -0.17
HERC1-205ENST00000559886 ZBED4O75132 1171 aa13.96□□□□□ -0.17
HERC1-205ENST00000559886 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
HERC1-205ENST00000559886 HUNKP57058 714 aa13.96□□□□□ -0.17
HERC1-205ENST00000559886 REXO1Q8N1G1 1221 aaKnown RBP13.96□□□□□ -0.17
HERC1-205ENST00000559886 POLR3EQ9NVU0 708 aa13.96□□□□□ -0.17
HERC1-205ENST00000559886 RTEL1Q9NZ71 1219 aa13.96□□□□□ -0.17
HERC1-205ENST00000559886 ZBTB48P10074 688 aaPredicted RBP13.96□□□□□ -0.18
HERC1-205ENST00000559886 PIK3AP1Q6ZUJ8 805 aa13.96□□□□□ -0.18
HERC1-205ENST00000559886 REPS2Q8NFH8 660 aa13.96□□□□□ -0.18
HERC1-205ENST00000559886 FTOQ9C0B1 505 aaKnown RBP eCLIP13.96□□□□□ -0.18
HERC1-205ENST00000559886 PNMA2Q9UL42 364 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms