RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 ZBED4O75132 1171 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 ALX1Q15699 326 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 BADQ92934 168 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 CHMP4CQ96CF2 233 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 EVI5LQ96CN4 794 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 A1CFQ9NQ94 594 aaKnown RBP22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 ZMYM6O95789 1325 aa22.31■■□□□ 1.16
CDC42BPB-206ENST00000559790 PLA2G6O60733 806 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 MCCP23508 829 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 CST5P28325 142 aaPredicted RBP22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 STAT2P52630 851 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 EPHB4P54760 987 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 SHHQ15465 462 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 ARMCX2Q7L311 632 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 CHST13Q8NET6 341 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 DDX11Q96FC9 970 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 GUCD1Q96NT3 240 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 UPF3AQ9H1J1 476 aaKnown RBP22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 PRDM5Q9NQX1 630 aaPredicted RBP22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 HOMER2Q9NSB8 354 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 CNPY2Q9Y2B0 182 aa22.3■■□□□ 1.16
CDC42BPB-206ENST00000559790 SOWAHBA6NEL2 793 aa22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 SLC4A3P48751 1232 aa22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 SNAP25P60880 206 aa22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 KCTD1Q719H9 257 aa22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 SMC5Q8IY18 1101 aa22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 LBHD1Q9BQE6 289 aaPredicted RBP22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 HELLSQ9NRZ9 838 aa22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 ZHX1Q9UKY1 873 aaPredicted RBP22.29■■□□□ 1.16
CDC42BPB-206ENST00000559790 CHD9Q3L8U1 2897 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 KIAA1217Q5T5P2 1943 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 PTGS1P23219 599 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 ACLYP53396 1101 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 NMIQ13287 307 aaPredicted RBP22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 ACVR2BQ13705 512 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 MUM1L1Q5H9M0 696 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 RNF180Q86T96 592 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 CCDC144CPQ8IYA2 1237 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 STAG1Q8WVM7 1258 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 RNF146Q9NTX7 359 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 FBXO40Q9UH90 709 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 PRR12Q9ULL5 1215 aa22.28■■□□□ 1.16
CDC42BPB-206ENST00000559790 SCN10AQ9Y5Y9 1956 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 TSPY2A6NKD2 308 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 KIAA0355O15063 1070 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 DUSP11O75319 330 aaKnown RBP22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 FGAP02671 866 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 SLC1A4P43007 532 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 NKX3-2P78367 333 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 CCDC144BQ3MJ40 725 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 FAM160B2Q86V87 743 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 TSEN34Q9BSV6 310 aaKnown RBP22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 LNPKQ9C0E8 428 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 ACAD9Q9H845 621 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 FAM184BQ9ULE4 1060 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 STX8Q9UNK0 236 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 STXBP5LQ9Y2K9 1186 aa22.27■■□□□ 1.16
CDC42BPB-206ENST00000559790 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 SLC3A2P08195 630 aaKnown RBP22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 CLTBP09497 229 aa22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 FAAP100Q0VG06 881 aa22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 FAM109BQ6ICB4 259 aaPredicted RBP22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 RCSD1Q6JBY9 416 aa22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 ANKRD33Q7Z3H0 272 aa22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 TBC1D10CQ8IV04 446 aa22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 ANKRD35Q8N283 1001 aa22.26■■□□□ 1.15
CDC42BPB-206ENST00000559790 MYO9BQ13459 2157 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 SCN5AQ14524 2016 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 FDX1P10109 184 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 HSPD1P10809 573 aaKnown RBP22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 GJA9P57773 515 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 KCNA10Q16322 511 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 TTBK2Q6IQ55 1244 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 ABHD16BQ9H3Z7 469 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 PRKAG2Q9UGJ0 569 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 TBX21Q9UL17 535 aa22.25■■□□□ 1.15
CDC42BPB-206ENST00000559790 TANC1Q9C0D5 1861 aa22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 PQBP1O60828 265 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 IGHDP01880 384 aa22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 TMEM63BQ5T3F8 832 aa22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 CHURC1Q8WUH1 139 aa22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 PURBQ96QR8 312 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 RANBP17Q9H2T7 1088 aaKnown RBP22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 CCDC171Q6TFL3 1326 aa22.24■■□□□ 1.15
CDC42BPB-206ENST00000559790 MOXD2PA6NHM9 499 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 RANBP6O60518 1105 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 CDK7P50613 346 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 CCDC174Q6PII3 467 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 BTNL9Q6UXG8 535 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 PLEKHM2Q8IWE5 1019 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 TMEM47Q9BQJ4 181 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 CYP39A1Q9NYL5 469 aa22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 GNEQ9Y223 722 aaKnown RBP22.23■■□□□ 1.15
CDC42BPB-206ENST00000559790 CHD7Q9P2D1 2997 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 ALAS1P13196 640 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 HAND2P61296 217 aa22.22■■□□□ 1.15
CDC42BPB-206ENST00000559790 TKFCQ3LXA3 575 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms