RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 IL17RAQ96F46 866 aa23.65■■□□□ 1.38
TSPAN3-207ENST00000559494 NUDT12Q9BQG2 462 aa23.65■■□□□ 1.38
TSPAN3-207ENST00000559494 VAT1LQ9HCJ6 419 aa23.65■■□□□ 1.38
TSPAN3-207ENST00000559494 CYP46A1Q9Y6A2 500 aa23.65■■□□□ 1.38
TSPAN3-207ENST00000559494 ZNFX1Q9P2E3 1918 aaKnown RBP23.65■■□□□ 1.38
TSPAN3-207ENST00000559494 STRNO43815 780 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 RXRAP19793 462 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 IRF5Q13568 498 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 NBPF11Q86T75 865 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 FBXL16Q8N461 479 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 RAET1EQ8TD07 263 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 AGXT2Q9BYV1 514 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 UPF3BQ9BZI7 483 aaKnown RBP23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 JMJD4Q9H9V9 463 aa23.64■■□□□ 1.38
TSPAN3-207ENST00000559494 SLC15A5A6NIM6 579 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 COPB2P35606 906 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 FGD1P98174 961 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 GRB14Q14449 540 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 APOA5Q6Q788 366 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 BRF1Q92994 677 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 HPS5Q9UPZ3 1129 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 IVNS1ABPQ9Y6Y0 642 aa23.63■■□□□ 1.37
TSPAN3-207ENST00000559494 ICAM1P05362 532 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 CALM1P0DP23 149 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 CALM2P0DP24 149 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 CALM3P0DP25 149 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 TAL1P17542 331 aaPredicted RBP23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 CYP2B6P20813 491 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 APOBRQ0VD83 1088 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 CCDC144CPQ8IYA2 1237 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 CTCFLQ8NI51 663 aaPredicted RBP23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 SOCS4Q8WXH5 440 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 RIOX1Q9H6W3 641 aa23.62■■□□□ 1.37
TSPAN3-207ENST00000559494 KLF18A0A0U1RQI7 1052 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 CYTH3O43739 400 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 ALAS1P13196 640 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 MAP2K5Q13163 448 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 SYNE3Q6ZMZ3 975 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 ABRAQ8N0Z2 381 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 FANCBQ8NB91 859 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 MTMR8Q96EF0 704 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 CCPG1Q9ULG6 757 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 CENPFP49454 3210 aa23.61■■□□□ 1.37
TSPAN3-207ENST00000559494 DHX16O60231 1041 aaKnown RBP23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 ADCY3O60266 1144 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 COBLO75128 1261 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 FCER1AP12319 257 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 ADORA2AP29274 412 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 KIF5BP33176 963 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 TOB2Q14106 344 aaPredicted RBP23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 CDC37Q16543 378 aaPredicted RBP23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 TKFCQ3LXA3 575 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 MICU3Q86XE3 530 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 CHST13Q8NET6 341 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 TRERF1Q96PN7 1200 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 MMP19Q99542 508 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 HOMER2Q9NSB8 354 aa23.6■■□□□ 1.37
TSPAN3-207ENST00000559494 ZBTB43O43298 467 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 XRCC5P13010 732 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 ELNP15502 786 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 QRICH1Q2TAL8 776 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 MUM1L1Q5H9M0 696 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 ABHD8Q96I13 439 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 RNF146Q9NTX7 359 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 PDRG1Q9NUG6 133 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 PLEKHA8P1O95397 391 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 GRK4P32298 578 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 RGS2P41220 211 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 GNAQP50148 359 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 SRBD1Q8N5C6 995 aaKnown RBP23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 NPLOC4Q8TAT6 608 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 PXYLP1Q8TE99 480 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 FBXO40Q9UH90 709 aa23.59■■□□□ 1.37
TSPAN3-207ENST00000559494 HOXC6P09630 235 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 SMARCA1P28370 1054 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 EVCP57679 992 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 KCTD2Q14681 263 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 SLC9C1Q4G0N8 1177 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 DPP9Q86TI2 863 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 CMTR1Q8N1G2 835 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 SLAIN1Q8ND83 568 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 PIGSQ96S52 555 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 LARP6Q9BRS8 491 aaKnown RBP23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 ACAD9Q9H845 621 aa23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 FAM217BQ9NTX9 383 aaPredicted RBP23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 NAP1L2Q9ULW6 460 aaPredicted RBP23.58■■□□□ 1.36
TSPAN3-207ENST00000559494 MYH6P13533 1939 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 PGK2P07205 417 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 CCL14Q16627 93 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 CLEC4DQ8WXI8 215 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 ARMC5Q96C12 935 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 LZTS2Q9BRK4 669 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 SPZ1Q9BXG8 430 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 PNMA2Q9UL42 364 aa23.57■■□□□ 1.36
TSPAN3-207ENST00000559494 GOLGA8AA7E2F4 631 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 GOLGA8BA8MQT2 603 aa23.56■■□□□ 1.36
TSPAN3-207ENST00000559494 ZBTB5O15062 677 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms