RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PNMA1Q8ND90 353 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 TRPV1Q8NER1 839 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
SNX1-207ENST00000559401 C11orf49Q9H6J7 331 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 OGDHLQ9ULD0 1010 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 CCPG1Q9ULG6 757 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 CNPY2Q9Y2B0 182 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 MCM3APO60318 1980 aa9.61□□□□□ -0.87
SNX1-207ENST00000559401 CENPFP49454 3210 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 EVI5O60447 810 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 PLA2G6O60733 806 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 CYP21A2P08686 494 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 GOLGA8HP0CJ92 632 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
SNX1-207ENST00000559401 ZNF543Q08ER8 600 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 ZNF792Q3KQV3 632 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 TKFCQ3LXA3 575 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 GPATCH4Q5T3I0 446 aaKnown RBP9.6□□□□□ -0.87
SNX1-207ENST00000559401 IFIT1BQ5T764 474 aaKnown RBP9.6□□□□□ -0.87
SNX1-207ENST00000559401 LHX8Q68G74 356 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 NSMFQ6X4W1 530 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 UBE2Q1Q7Z7E8 422 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 ENAHQ8N8S7 591 aaPredicted RBP9.6□□□□□ -0.87
SNX1-207ENST00000559401 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 TINF2Q9BSI4 451 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 ANO2Q9NQ90 1003 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 ZSWIM5Q9P217 1185 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
SNX1-207ENST00000559401 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
SNX1-207ENST00000559401 NR2E3Q9Y5X4 410 aa9.6□□□□□ -0.87
SNX1-207ENST00000559401 ZNF536O15090 1300 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 ERICH2A1L162 156 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 KBTBD13C9JR72 458 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 H0YGN5 161 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 SEPT4O43236 478 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 ICAM1P05362 532 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 SART3Q15020 963 aaKnown RBP9.59□□□□□ -0.87
SNX1-207ENST00000559401 BMP2KLQ5H9B9 411 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 BTNL9Q6UXG8 535 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 C7orf61Q8IZ16 206 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 NCOA7Q8NI08 942 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 ESYT1Q9BSJ8 1104 aa9.59□□□□□ -0.87
SNX1-207ENST00000559401 RANBP17Q9H2T7 1088 aaKnown RBP9.59□□□□□ -0.87
SNX1-207ENST00000559401 A1CFQ9NQ94 594 aaKnown RBP9.59□□□□□ -0.87
SNX1-207ENST00000559401 RBM8AQ9Y5S9 174 aaKnown RBP9.59□□□□□ -0.87
SNX1-207ENST00000559401 PFASO15067 1338 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 DNAJC25-GNG10A0A024R161 153 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 E7EWF7 191 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 IFIT3O14879 490 aaKnown RBP9.58□□□□□ -0.88
SNX1-207ENST00000559401 PARP1P09874 1014 aaKnown RBP9.58□□□□□ -0.88
SNX1-207ENST00000559401 RARBP10826 455 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 CNTN2Q02246 1040 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 USH1GQ495M9 461 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 ASPRV1Q53RT3 343 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 MUM1L1Q5H9M0 696 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 GJC2Q5T442 439 aaPredicted RBP9.58□□□□□ -0.88
SNX1-207ENST00000559401 CYB5R4Q7L1T6 521 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 ARRDC4Q8NCT1 418 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 MAP4K1Q92918 833 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 UBA5Q9GZZ9 404 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 CPVLQ9H3G5 476 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 XPNPEP3Q9NQH7 507 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 SMCHD1A6NHR9 2005 aa9.58□□□□□ -0.88
SNX1-207ENST00000559401 SYNGAP1Q96PV0 1343 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 LRRC37A2A6NM11 1700 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 LCTP09848 1927 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 PTPDC1A2A3K4 754 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 CDC45O75419 566 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 IGHA2P01877 340 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 CENPBP07199 599 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 SNHG28P0DPA3 235 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 AKR1A1P14550 325 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 MNX1P50219 401 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 WTAPQ15007 396 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 CDC37Q16543 378 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 TMEM67Q5HYA8 995 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 STOX1Q6ZVD7 989 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.57□□□□□ -0.88
SNX1-207ENST00000559401 ARMCX2Q7L311 632 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 CHST3Q7LGC8 479 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 ZNF467Q7Z7K2 595 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 MSL3Q8N5Y2 521 aaKnown RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 LENG1Q96BZ8 264 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 SENP6Q9GZR1 1112 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 VAT1LQ9HCJ6 419 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.57□□□□□ -0.88
SNX1-207ENST00000559401 CYP39A1Q9NYL5 469 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 NRBP1Q9UHY1 535 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 PNMA2Q9UL42 364 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 TAF6LQ9Y6J9 622 aa9.57□□□□□ -0.88
SNX1-207ENST00000559401 ASB14A6NK59 587 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 DNM1LO00429 736 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 NFIBO00712 420 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 PGK1P00558 417 aa9.56□□□□□ -0.88
SNX1-207ENST00000559401 ZNF865P0CJ78 1059 aaPredicted RBP9.56□□□□□ -0.88
SNX1-207ENST00000559401 BAATQ14032 418 aaPredicted RBP9.56□□□□□ -0.88
SNX1-207ENST00000559401 SEC23AQ15436 765 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms