RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 TMEM31Q5JXX7 168 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 SLC9C2Q5TAH2 1124 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 SNRNP48Q6IEG0 339 aaKnown RBP9.05□□□□□ -0.96
HMG20A-207ENST00000559035 ARMCX2Q7L311 632 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 OTOP2Q7RTS6 562 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 TMEM57Q8N5G2 664 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 TSPYL2Q9H2G4 693 aaPredicted RBP9.05□□□□□ -0.96
HMG20A-207ENST00000559035 ABHD16BQ9H3Z7 469 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 GNEQ9Y223 722 aaKnown RBP9.05□□□□□ -0.96
HMG20A-207ENST00000559035 MYH7P12883 1935 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 ZNF318Q5VUA4 2279 aa9.05□□□□□ -0.96
HMG20A-207ENST00000559035 SCN5AQ14524 2016 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 CYP2D7A0A087X1C5 515 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-207ENST00000559035 APBB1O00213 710 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 PRKAB2O43741 272 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 B4GALT4O60513 344 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 CDK8P49336 464 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 TTF1Q15361 905 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-207ENST00000559035 GNASQ5JWF2 1037 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 SAMD1Q6SPF0 538 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-207ENST00000559035 MICALL1Q8N3F8 863 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMG20A-207ENST00000559035 NUP88Q99567 741 aaPredicted RBP9.04□□□□□ -0.96
HMG20A-207ENST00000559035 SLF1Q9BQI6 1058 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 ARMT1Q9H993 441 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 KANSL2Q9H9L4 492 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 COG5Q9UP83 839 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
HMG20A-207ENST00000559035 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
HMG20A-207ENST00000559035 LPXNO60711 386 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CABYRO75952 493 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 NDUFB10O96000 172 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CA3P07451 260 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 PFKMP08237 780 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 ATP2A2P16615 1042 aaKnown RBP9.03□□□□□ -0.96
HMG20A-207ENST00000559035 PTGS1P23219 599 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 ADD2P35612 726 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CCL23P55773 120 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 BEX3Q00994 111 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 TTLL4Q14679 1199 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 KRT40Q6A162 431 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CXCL17Q6UXB2 119 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 TLK2Q86UE8 772 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 AACSQ86V21 672 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CCDC144CPQ8IYA2 1237 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CLUAP1Q96AJ1 413 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 SEZ6LQ9BYH1 1024 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 SPC25Q9HBM1 224 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 SLC38A10Q9HBR0 1119 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 GOPCQ9HD26 462 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 CD320Q9NPF0 282 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 ATP8A2Q9NTI2 1148 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 SLC4A7Q9Y6M7 1214 aa9.03□□□□□ -0.96
HMG20A-207ENST00000559035 PLIN4Q96Q06 1357 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 MYH4Q9Y623 1939 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 IGKV6D-41A0A0C4DH26 115 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 FAM86C2PA6NEL3 165 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 PI4K2BG5E9Z4 385 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 RFXAPO00287 272 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 MBD4O95243 580 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 OAZ1P54368 228 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 TAP1Q03518 808 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 ITGA7Q13683 1181 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 SLFNL1Q499Z3 407 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 CEP85Q6P2H3 762 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 DDX11Q96FC9 970 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 SCLYQ96I15 445 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 TRPV6Q9H1D0 765 aa9.02□□□□□ -0.97
HMG20A-207ENST00000559035 TET1Q8NFU7 2136 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 USP17L12C9JPN9 530 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 USP17L21D6R901 530 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 GOLIM4O00461 696 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 CHGBP05060 677 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 RASA1P20936 1047 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 CNTN2Q02246 1040 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 TNFAIP2Q03169 654 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 FSCN1Q16658 493 aaKnown RBP9.01□□□□□ -0.97
HMG20A-207ENST00000559035 TMEM67Q5HYA8 995 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 SPRED2Q7Z698 418 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 ERC1Q8IUD2 1116 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 PRPF38AQ8NAV1 312 aaKnown RBP9.01□□□□□ -0.97
HMG20A-207ENST00000559035 CHST13Q8NET6 341 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 CFAP54Q96N23 3096 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 SLC9A7Q96T83 725 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 ALDH8A1Q9H2A2 487 aaPredicted RBP9.01□□□□□ -0.97
HMG20A-207ENST00000559035 RAVER2Q9HCJ3 691 aaKnown RBP9.01□□□□□ -0.97
HMG20A-207ENST00000559035 A1CFQ9NQ94 594 aaKnown RBP9.01□□□□□ -0.97
HMG20A-207ENST00000559035 NYAP2Q9P242 653 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 FBXO40Q9UH90 709 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 EXOC6BQ9Y2D4 811 aa9.01□□□□□ -0.97
HMG20A-207ENST00000559035 SOWAHBA6NEL2 793 aa9□□□□□ -0.97
HMG20A-207ENST00000559035 ZBBXA8MT70 800 aa9□□□□□ -0.97
HMG20A-207ENST00000559035 F5H6K3 240 aa9□□□□□ -0.97
HMG20A-207ENST00000559035 GTPBP6O43824 516 aaPredicted RBP9□□□□□ -0.97
HMG20A-207ENST00000559035 RLBP1P12271 317 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms