RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 PTPREP23469 700 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 SLC16A2P36021 539 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 STAT3P40763 770 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 MORN1Q5T089 497 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 SNRNP48Q6IEG0 339 aaKnown RBP11.35□□□□□ -0.59
SPG11-214ENST00000558989 TTBK2Q6IQ55 1244 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 MB21D1Q8N884 522 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 NPLOC4Q8TAT6 608 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 SOCS4Q8WXH5 440 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 HOMER2Q9NSB8 354 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
SPG11-214ENST00000558989 ZBED4O75132 1171 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 HMGCRP04035 888 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 PGK2P07205 417 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 ADORA2AP29274 412 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 STAT2P52630 851 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 KIAA1211Q6ZU35 1233 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 CHST3Q7LGC8 479 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 PRPF38AQ8NAV1 312 aaKnown RBP11.34□□□□□ -0.59
SPG11-214ENST00000558989 CALR3Q96L12 384 aaKnown RBP11.34□□□□□ -0.59
SPG11-214ENST00000558989 DEFB118Q96PH6 123 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 ANO2Q9NQ90 1003 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 FLRT1Q9NZU1 646 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 FEM1BQ9UK73 627 aa11.34□□□□□ -0.59
SPG11-214ENST00000558989 SLC15A5A6NIM6 579 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 CYP21A2P08686 494 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 GOLGA8HP0CJ92 632 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 TOP1P11387 765 aaKnown RBP11.33□□□□□ -0.6
SPG11-214ENST00000558989 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
SPG11-214ENST00000558989 RGS19P49795 217 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 MMP19Q99542 508 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 APBA2Q99767 749 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 ESYT1Q9BSJ8 1104 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 CPVLQ9H3G5 476 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 ZNF214Q9UL59 606 aaPredicted RBP11.33□□□□□ -0.6
SPG11-214ENST00000558989 ADAMTS5Q9UNA0 930 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 RIPK3Q9Y572 518 aa11.33□□□□□ -0.6
SPG11-214ENST00000558989 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
SPG11-214ENST00000558989 COBLO75128 1261 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 CNGA1P29973 690 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 CYP2C19P33261 490 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 GRB14Q14449 540 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 BMP2KLQ5H9B9 411 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 CYB5R4Q7L1T6 521 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 IQCA1Q86XH1 822 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 U2AF1L4Q8WU68 220 aaKnown RBP11.32□□□□□ -0.6
SPG11-214ENST00000558989 USP6NLQ92738 828 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 KRT23Q9C075 422 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.32□□□□□ -0.6
SPG11-214ENST00000558989 FRMPD3Q5JV73 1810 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 TNKSO95271 1327 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 TFRCP02786 760 aaKnown RBP11.32□□□□□ -0.6
SPG11-214ENST00000558989 FCER1AP12319 257 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
SPG11-214ENST00000558989 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
SPG11-214ENST00000558989 TRDNQ13061 729 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 TSR1Q2NL82 804 aaKnown RBP11.32□□□□□ -0.6
SPG11-214ENST00000558989 STOX1Q6ZVD7 989 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 RIOX2Q8IUF8 465 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 CHURC1Q8WUH1 139 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 SHISA4Q96DD7 197 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 AGBL1Q96MI9 1066 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 ZSCAN10Q96SZ4 725 aaPredicted RBP11.32□□□□□ -0.6
SPG11-214ENST00000558989 UBAC1Q9BSL1 405 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 MROH8Q9H579 483 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 KAT14Q9H8E8 782 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 PRR12Q9ULL5 1215 aa11.32□□□□□ -0.6
SPG11-214ENST00000558989 E7EWF7 191 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 SLC25A27O95847 323 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 PCP11498 1178 aaKnown RBP11.31□□□□□ -0.6
SPG11-214ENST00000558989 ALAS1P13196 640 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 KCTD2Q14681 263 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 PRAMEF19Q5SWL8 479 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
SPG11-214ENST00000558989 ENAHQ8N8S7 591 aaPredicted RBP11.31□□□□□ -0.6
SPG11-214ENST00000558989 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 SHCBP1Q8NEM2 672 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 OXER1Q8TDS5 423 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 DCAF4Q8WV16 495 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 TEX13BQ9BXU2 312 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
SPG11-214ENST00000558989 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 HMX1Q9NP08 348 aaPredicted RBP11.31□□□□□ -0.6
SPG11-214ENST00000558989 PPP4R2Q9NY27 417 aa11.31□□□□□ -0.6
SPG11-214ENST00000558989 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
SPG11-214ENST00000558989 ZNF236Q9UL36 1845 aa11.3□□□□□ -0.6
SPG11-214ENST00000558989 GJB1P08034 283 aa11.3□□□□□ -0.6
SPG11-214ENST00000558989 PDHBP11177 359 aa11.3□□□□□ -0.6
SPG11-214ENST00000558989 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
SPG11-214ENST00000558989 ANO1Q5XXA6 986 aa11.3□□□□□ -0.6
SPG11-214ENST00000558989 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
SPG11-214ENST00000558989 MAP4K1Q92918 833 aa11.3□□□□□ -0.6
SPG11-214ENST00000558989 DDX11Q96FC9 970 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms