RNA–Protein interactions for RNA: ENST00000558943.5

SPG21-208, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-208ENST00000558943 PPP2R3AQ06190 1150 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 RRS1Q15050 365 aaKnown RBP6.64□□□□□ -1.35
SPG21-208ENST00000558943 KIF4BQ2VIQ3 1234 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 HSP90AB2PQ58FF8 381 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
SPG21-208ENST00000558943 PIDD1Q9HB75 910 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 DDX21Q9NR30 783 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPG21-208ENST00000558943 DAGLAQ9Y4D2 1042 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 USP42Q9H9J4 1324 aaKnown RBP6.64□□□□□ -1.35
SPG21-208ENST00000558943 KIAA1551Q9HCM1 1747 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 TOGARAM1Q9Y4F4 1720 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 KIF13BQ9NQT8 1826 aa6.64□□□□□ -1.35
SPG21-208ENST00000558943 CARNS1A5YM72 827 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 GPR182O15218 404 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 TNRC18O15417 2968 aaPredicted RBP6.63□□□□□ -1.35
SPG21-208ENST00000558943 GADD45BO75293 160 aaPredicted RBP6.63□□□□□ -1.35
SPG21-208ENST00000558943 SERPINB2P05120 415 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 ID3Q02535 119 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 HABP4Q5JVS0 413 aaKnown RBP6.63□□□□□ -1.35
SPG21-208ENST00000558943 EDC4Q6P2E9 1401 aaKnown RBP6.63□□□□□ -1.35
SPG21-208ENST00000558943 UBR3Q6ZT12 1888 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 POU5F2Q8N7G0 328 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 LRRC4CQ9HCJ2 640 aa6.63□□□□□ -1.35
SPG21-208ENST00000558943 ERVV-2B6SEH9 535 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 BIN1O00499 593 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 ECEL1O95672 775 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 GSTP1P09211 210 aaKnown RBP6.62□□□□□ -1.35
SPG21-208ENST00000558943 PHKG2P15735 406 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 PDE6BP35913 854 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 CRKLP46109 303 aaKnown RBP6.62□□□□□ -1.35
SPG21-208ENST00000558943 NFIXQ14938 502 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 SOGA3Q5TF21 947 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 GLIS3Q8NEA6 775 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 BCL7CQ8WUZ0 217 aaPredicted RBP6.62□□□□□ -1.35
SPG21-208ENST00000558943 PPP1R9AQ9ULJ8 1098 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 TAF1LQ8IZX4 1826 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 ARFGEF1Q9Y6D6 1849 aa6.62□□□□□ -1.35
SPG21-208ENST00000558943 RTL1A6NKG5 1358 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 LTBP3Q9NS15 1303 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 GRM2Q14416 872 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 FANCD2OSQ96PS1 177 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 NIF3L1Q9GZT8 377 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 CCDC86Q9H6F5 360 aaKnown RBP6.61□□□□□ -1.35
SPG21-208ENST00000558943 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 LTN1O94822 1766 aa6.61□□□□□ -1.35
SPG21-208ENST00000558943 INSRP06213 1382 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 RAB3GAP2Q9H2M9 1393 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 HSP90AB1P08238 724 aaKnown RBP6.6□□□□□ -1.35
SPG21-208ENST00000558943 CST9Q5W186 159 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 CIAPIN1Q6FI81 312 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 DTHD1Q6ZMT9 781 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 ERICH6Q7L0X2 663 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 SMYD4Q8IYR2 804 aaPredicted RBP6.6□□□□□ -1.35
SPG21-208ENST00000558943 BRIP1Q9BX63 1249 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 NARFQ9UHQ1 456 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 VAV3Q9UKW4 847 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 PCOLCE2Q9UKZ9 415 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 PCDHGC5Q9Y5F6 944 aa6.6□□□□□ -1.35
SPG21-208ENST00000558943 FAM208AQ9UK61 1670 aaKnown RBP6.6□□□□□ -1.35
SPG21-208ENST00000558943 A0A1W2PP64 1363 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 RNF123Q5XPI4 1314 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 NPHP1O15259 732 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 PPM1GO15355 546 aaPredicted RBP6.59□□□□□ -1.35
SPG21-208ENST00000558943 DYNC1LI2O43237 492 aaPredicted RBP6.59□□□□□ -1.35
SPG21-208ENST00000558943 FAAP100Q0VG06 881 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 FZD5Q13467 585 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 OGFOD2Q6N063 350 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 GPC2Q8N158 579 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 EMILIN2Q9BXX0 1053 aa6.59□□□□□ -1.35
SPG21-208ENST00000558943 ROCK2O75116 1388 aaKnown RBP6.58□□□□□ -1.36
SPG21-208ENST00000558943 KDRP35968 1356 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 SBF1O95248 1867 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 TRAF5O00463 557 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 ZNF862O60290 1169 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 LIG1P18858 919 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 PRKCQQ04759 706 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 FMR1Q06787 632 aaKnown RBP eCLIP6.58□□□□□ -1.36
SPG21-208ENST00000558943 NOGQ13253 232 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 SCARA3Q6AZY7 606 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 SAPCD2Q86UD0 394 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 PDZD3Q86UT5 571 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 SLC17A8Q8NDX2 589 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 JDP2Q8WYK2 163 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 HHIPL1Q96JK4 782 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 DISC1Q9NRI5 854 aa6.58□□□□□ -1.36
SPG21-208ENST00000558943 GPN3Q9UHW5 284 aaPredicted RBP6.58□□□□□ -1.36
SPG21-208ENST00000558943 BRCA1P38398 1863 aaKnown RBP6.58□□□□□ -1.36
SPG21-208ENST00000558943 ZNF541Q9H0D2 1346 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 FYB1O15117 783 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 CELF2O95319 508 aaKnown RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 FAM87AP0C7U9 286 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 FUT4P22083 530 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 ERVK-24P63145 666 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 PLCL1Q15111 1095 aa6.57□□□□□ -1.36
SPG21-208ENST00000558943 IFI16Q16666 785 aaKnown RBP6.57□□□□□ -1.36
SPG21-208ENST00000558943 CCDC93Q567U6 631 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms