RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 PAGE5Q96GU1 130 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 NAPGQ99747 312 aaPredicted RBP13.59□□□□□ -0.23
SEC11A-206ENST00000558924 NYXQ9GZU5 481 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 MRFAP1Q9Y605 127 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 TNS2Q63HR2 1409 aa13.59□□□□□ -0.23
SEC11A-206ENST00000558924 GOLGA6L9A6NEM1 432 aa13.58□□□□□ -0.23
SEC11A-206ENST00000558924 ASIC1P78348 528 aa13.58□□□□□ -0.23
SEC11A-206ENST00000558924 SLC7A5Q01650 507 aa13.58□□□□□ -0.23
SEC11A-206ENST00000558924 KCTD16Q68DU8 428 aa13.58□□□□□ -0.23
SEC11A-206ENST00000558924 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.23
SEC11A-206ENST00000558924 ZNF622Q969S3 477 aaKnown RBP eCLIP13.58□□□□□ -0.23
SEC11A-206ENST00000558924 TECP42680 631 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 BTDP43251 543 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 TBC1D7Q9P0N9 293 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 SAMM50Q9Y512 469 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 TOM1O60784 492 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
SEC11A-206ENST00000558924 TROAPQ12815 778 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 TMTC3Q6ZXV5 915 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 ZNF384Q8TF68 577 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 RABGGTAQ92696 567 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 ACBD3Q9H3P7 528 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 SMARCAL1Q9NZC9 954 aa13.58□□□□□ -0.24
SEC11A-206ENST00000558924 CLGNO14967 610 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
SEC11A-206ENST00000558924 ATP1A2P50993 1020 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 CASP8Q14790 479 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 KANK3Q6NY19 840 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 BLIDQ8IZY5 108 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 CEP112Q8N8E3 955 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 COA7Q96BR5 231 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 TMX4Q9H1E5 349 aaPredicted RBP13.57□□□□□ -0.24
SEC11A-206ENST00000558924 ZNHIT6Q9NWK9 470 aaKnown RBP13.57□□□□□ -0.24
SEC11A-206ENST00000558924 ZNF185O15231 689 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 SLC16A2P36021 539 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 CORO7P57737 925 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 PKN1Q16512 942 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 NELFBQ8WX92 580 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 IFT81Q8WYA0 676 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 BCCIPQ9P287 314 aaKnown RBP eCLIP13.57□□□□□ -0.24
SEC11A-206ENST00000558924 CDC23Q9UJX2 597 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 MAP2K2P36507 400 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 MAP3K9P80192 1104 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 ZNF512BQ96KM6 892 aaPredicted RBP13.57□□□□□ -0.24
SEC11A-206ENST00000558924 EYA3Q99504 573 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 ANKRD2Q9GZV1 360 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 HSD3B7Q9H2F3 369 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 RBM28Q9NW13 759 aaKnown RBP13.57□□□□□ -0.24
SEC11A-206ENST00000558924 HPSEQ9Y251 543 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 ADGRG1Q9Y653 693 aa13.57□□□□□ -0.24
SEC11A-206ENST00000558924 SCP2P22307 547 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 SMCR8Q8TEV9 937 aaPredicted RBP13.56□□□□□ -0.24
SEC11A-206ENST00000558924 CDCA7Q9BWT1 371 aaPredicted RBP13.56□□□□□ -0.24
SEC11A-206ENST00000558924 MYO5AQ9Y4I1 1855 aaKnown RBP13.56□□□□□ -0.24
SEC11A-206ENST00000558924 ALS2Q96Q42 1657 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 CALM1P0DP23 149 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 CALM2P0DP24 149 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 CALM3P0DP25 149 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 SEC23AQ15436 765 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 TDRD12Q587J7 1177 aaKnown RBP13.56□□□□□ -0.24
SEC11A-206ENST00000558924 SPTY2D1Q68D10 685 aaPredicted RBP13.56□□□□□ -0.24
SEC11A-206ENST00000558924 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 TCP11L1Q9NUJ3 509 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 TUBE1Q9UJT0 475 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 PNPLA7Q6ZV29 1317 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 IVLP07476 585 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 RNF187Q5TA31 235 aaPredicted RBP13.56□□□□□ -0.24
SEC11A-206ENST00000558924 MCTP2Q6DN12 878 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 MMRN2Q9H8L6 949 aa13.56□□□□□ -0.24
SEC11A-206ENST00000558924 BEND6Q5SZJ8 279 aaPredicted RBP13.55□□□□□ -0.24
SEC11A-206ENST00000558924 CCDC70Q6NSX1 233 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 RSRC2Q7L4I2 434 aaKnown RBP13.55□□□□□ -0.24
SEC11A-206ENST00000558924 ANKZF1Q9H8Y5 726 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 LUC7L2Q9Y383 392 aaKnown RBP13.55□□□□□ -0.24
SEC11A-206ENST00000558924 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 PRPF3O43395 683 aaKnown RBP13.55□□□□□ -0.24
SEC11A-206ENST00000558924 CCT5P48643 541 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 SNAP25P60880 206 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.241e-8■■■■■ 38.4
SEC11A-206ENST00000558924 SHISA4Q96DD7 197 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 JPH2Q9BR39 696 aaPredicted RBP13.55□□□□□ -0.24
SEC11A-206ENST00000558924 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.55□□□□□ -0.24
SEC11A-206ENST00000558924 MYO6Q9UM54 1294 aa13.55□□□□□ -0.24
SEC11A-206ENST00000558924 RNF40O75150 1001 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 TRIM37O94972 964 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
SEC11A-206ENST00000558924 C2orf54Q08AI8 447 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 TMEM60Q9H2L4 133 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 FAM207AQ9NSI2 230 aaPredicted RBP13.54□□□□□ -0.24
SEC11A-206ENST00000558924 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 WDR19Q8NEZ3 1342 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 LRRIQ3A6PVS8 624 aaPredicted RBP13.54□□□□□ -0.24
SEC11A-206ENST00000558924 MMS22LQ6ZRQ5 1243 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 TADA2BQ86TJ2 420 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 PIGSQ96S52 555 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 TMEM260Q9NX78 707 aa13.54□□□□□ -0.24
SEC11A-206ENST00000558924 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms