RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 SNRNP48Q6IEG0 339 aaKnown RBP12.02□□□□□ -0.48
TPM1-212ENST00000558347 KIFC2Q96AC6 838 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 MAML3Q96JK9 1138 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 MMP19Q99542 508 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 SLC38A10Q9HBR0 1119 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 FEM1BQ9UK73 627 aa12.02□□□□□ -0.48
TPM1-212ENST00000558347 RANBP2P49792 3224 aaKnown RBP12.02□□□□□ -0.48
TPM1-212ENST00000558347 LAMA4Q16363 1823 aa12.02□□□□□ -0.49
TPM1-212ENST00000558347 TMEM232C9JQI7 657 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 CNGA1P29973 690 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 TSGA10IPQ3SY00 556 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 RRP12Q5JTH9 1297 aaKnown RBP12.01□□□□□ -0.49
TPM1-212ENST00000558347 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 TBC1D10CQ8IV04 446 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 TEX13BQ9BXU2 312 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 C11orf49Q9H6J7 331 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 FOXD4L1Q9NU39 408 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 DDX20Q9UHI6 824 aaKnown RBP12.01□□□□□ -0.49
TPM1-212ENST00000558347 PFASO15067 1338 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 ZBED4O75132 1171 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 COPB2P35606 906 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 SLC1A4P43007 532 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 ZNF445P59923 1031 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 CUL4AQ13619 759 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 KCTD2Q14681 263 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 ZNF792Q3KQV3 632 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 HABP4Q5JVS0 413 aaKnown RBP12.01□□□□□ -0.49
TPM1-212ENST00000558347 PPP4R3BQ5MIZ7 849 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 AKNAD1Q5T1N1 836 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 CREB3L3Q68CJ9 461 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 INTS4Q96HW7 963 aaKnown RBP12.01□□□□□ -0.49
TPM1-212ENST00000558347 GMCL1Q96IK5 515 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 RAVER2Q9HCJ3 691 aaKnown RBP12.01□□□□□ -0.49
TPM1-212ENST00000558347 SLC5A4Q9NY91 659 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
TPM1-212ENST00000558347 SNX14Q9Y5W7 946 aa12.01□□□□□ -0.49
TPM1-212ENST00000558347 SLC27A2O14975 620 aa12□□□□□ -0.49
TPM1-212ENST00000558347 EVI5O60447 810 aa12□□□□□ -0.49
TPM1-212ENST00000558347 COL6A1P12109 1028 aa12□□□□□ -0.49
TPM1-212ENST00000558347 STAT2P52630 851 aa12□□□□□ -0.49
TPM1-212ENST00000558347 PRAMEF19Q5SWL8 479 aa12□□□□□ -0.49
TPM1-212ENST00000558347 KCTD1Q719H9 257 aa12□□□□□ -0.49
TPM1-212ENST00000558347 RASEFQ8IZ41 740 aa12□□□□□ -0.49
TPM1-212ENST00000558347 STAG1Q8WVM7 1258 aa12□□□□□ -0.49
TPM1-212ENST00000558347 TMEM47Q9BQJ4 181 aa12□□□□□ -0.49
TPM1-212ENST00000558347 TM6SF1Q9BZW5 370 aa12□□□□□ -0.49
TPM1-212ENST00000558347 MTMR7Q9Y216 660 aa12□□□□□ -0.49
TPM1-212ENST00000558347 NEDD4P46934 1319 aa12□□□□□ -0.49
TPM1-212ENST00000558347 SLC34A2O95436 690 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 ANO1Q5XXA6 986 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 RCSD1Q6JBY9 416 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 MFSD6Q6ZSS7 791 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 FAM160B2Q86V87 743 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 PANK2Q9BZ23 570 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 TCP11L1Q9NUJ3 509 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 CTDP1Q9Y5B0 961 aaPredicted RBP11.99□□□□□ -0.49
TPM1-212ENST00000558347 NR2E3Q9Y5X4 410 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
TPM1-212ENST00000558347 ZNF536O15090 1300 aa11.99□□□□□ -0.49
TPM1-212ENST00000558347 ZNF213O14771 459 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 SEPT4O43236 478 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 MSCO60682 206 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 PLA2G6O60733 806 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 TAL1P17542 331 aaPredicted RBP11.98□□□□□ -0.49
TPM1-212ENST00000558347 CLCN1P35523 988 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 OAZ1P54368 228 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 SNAP25P60880 206 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 IKQ13123 557 aaPredicted RBP11.98□□□□□ -0.49
TPM1-212ENST00000558347 KRT32Q14532 448 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
TPM1-212ENST00000558347 C7orf61Q8IZ16 206 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 AGBL1Q96MI9 1066 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 TINF2Q9BSI4 451 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 RRAGDQ9NQL2 400 aaPredicted RBP11.98□□□□□ -0.49
TPM1-212ENST00000558347 LMBRD1Q9NUN5 540 aa11.98□□□□□ -0.49
TPM1-212ENST00000558347 DIS3Q9Y2L1 958 aaKnown RBP11.98□□□□□ -0.49
TPM1-212ENST00000558347 DNAJC25-GNG10A0A024R161 153 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 CYP21A2P08686 494 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 FDX1P10109 184 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 TOP1P11387 765 aaKnown RBP11.97□□□□□ -0.49
TPM1-212ENST00000558347 PCP11498 1178 aaKnown RBP11.97□□□□□ -0.49
TPM1-212ENST00000558347 NEK4P51957 841 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 CCDC173Q0VFZ6 552 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 MCTP1Q6DN14 999 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 TTBK2Q6IQ55 1244 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 DCAF4Q8WV16 495 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 RNF41Q9H4P4 317 aaPredicted RBP11.97□□□□□ -0.49
TPM1-212ENST00000558347 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 PCDH10Q9P2E7 1040 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 PRR12Q9ULL5 1215 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 SZT2Q5T011 3432 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 SMCHD1A6NHR9 2005 aa11.97□□□□□ -0.49
TPM1-212ENST00000558347 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms