RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GJA9P57773 515 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 ICA1Q05084 483 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 ACVR2BQ13705 512 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 TTF1Q15361 905 aaPredicted RBP6.26□□□□□ -1.41
SPG11-208ENST00000558155 KIAA1755Q5JYT7 1200 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 OTOP2Q7RTS6 562 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 SIAH1Q8IUQ4 282 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 MICALL1Q8N3F8 863 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 NECAB3Q96P71 396 aaPredicted RBP6.26□□□□□ -1.41
SPG11-208ENST00000558155 RIOK1Q9BRS2 568 aaKnown RBP6.26□□□□□ -1.41
SPG11-208ENST00000558155 PPP1R12CQ9BZL4 782 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 ABHD16BQ9H3Z7 469 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 EPHX3Q9H6B9 360 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 KANSL2Q9H9L4 492 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 GOPCQ9HD26 462 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 COG5Q9UP83 839 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 CTDP1Q9Y5B0 961 aaPredicted RBP6.26□□□□□ -1.41
SPG11-208ENST00000558155 PCDHA11Q9Y5I1 949 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 ROBO3Q96MS0 1386 aa6.26□□□□□ -1.41
SPG11-208ENST00000558155 UNC80Q8N2C7 3258 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 RAD21O60216 631 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 BCAR3O75815 825 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 CABYRO75952 493 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 CD4P01730 458 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 EEF2P13639 858 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 AKR1B1P15121 316 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 POU3F3P20264 500 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 SLC4A3P48751 1232 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 RARSP54136 660 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 TFF2Q03403 129 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 TMEM67Q5HYA8 995 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 SLC9C2Q5TAH2 1124 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 PPP2R2DQ66LE6 453 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 NOL8Q76FK4 1167 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 FAM126BQ8IXS8 530 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 AMOTL1Q8IY63 956 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 SSH3Q8TE77 659 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 LENG1Q96BZ8 264 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 ZFP91Q96JP5 570 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 TEX13BQ9BXU2 312 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 UPF3AQ9H1J1 476 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 HIPK3Q9H422 1215 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 ANTXR1Q9H6X2 564 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 DCP1AQ9NPI6 582 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 FBXO28Q9NVF7 368 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 DBNLQ9UJU6 430 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 PPP1R9AQ9ULJ8 1098 aa6.25□□□□□ -1.41
SPG11-208ENST00000558155 YBX2Q9Y2T7 364 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 NOP58Q9Y2X3 529 aaKnown RBP6.25□□□□□ -1.41
SPG11-208ENST00000558155 DNAJC25-GNG10A0A024R161 153 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 MYADML2A6NDP7 307 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 ZBBXA8MT70 800 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 TLL1O43897 1013 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 ZBED4O75132 1171 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 ATP2A2P16615 1042 aaKnown RBP6.24□□□□□ -1.41
SPG11-208ENST00000558155 CDK8P49336 464 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 KCNQ1P51787 676 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 RABGGTBP53611 331 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 CCL23P55773 120 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 NKX3-2P78367 333 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 TNFAIP2Q03169 654 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 CCDC144BQ3MJ40 725 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 SNRNP48Q6IEG0 339 aaKnown RBP6.24□□□□□ -1.41
SPG11-208ENST00000558155 ALYREFQ86V81 257 aaKnown RBP6.24□□□□□ -1.41
SPG11-208ENST00000558155 ANKRD35Q8N283 1001 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 PRPF38AQ8NAV1 312 aaKnown RBP6.24□□□□□ -1.41
SPG11-208ENST00000558155 SLC43A3Q8NBI5 491 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 REPS2Q8NFH8 660 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 SDR42E1Q8WUS8 393 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 HLA-CQ95604 372 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 DYNLL2Q96FJ2 89 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 DDRGK1Q96HY6 314 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 SLF1Q9BQI6 1058 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 AP5M1Q9H0R1 490 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 ATP8A2Q9NTI2 1148 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 FBXO40Q9UH90 709 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 ZNF214Q9UL59 606 aaPredicted RBP6.24□□□□□ -1.41
SPG11-208ENST00000558155 MTCH2Q9Y6C9 303 aa6.24□□□□□ -1.41
SPG11-208ENST00000558155 COL11A1P12107 1806 aaPredicted RBP6.24□□□□□ -1.41
SPG11-208ENST00000558155 MYH8P13535 1937 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 A0A0G2JMZ2 1700 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 KIF28PB7ZC32 967 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 PI4K2BG5E9Z4 385 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 RIOK3O14730 519 aaKnown RBP6.23□□□□□ -1.41
SPG11-208ENST00000558155 ATP2A1O14983 1001 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 PFKMP08237 780 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 SUPT20HL2P0C7V6 817 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 CYP2D6P10635 497 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 ACTN1P12814 892 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 TRIM27P14373 513 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 MYOGP15173 224 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 PDE6AP16499 860 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 ITGA7Q13683 1181 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 FAM83BQ5T0W9 1011 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 C12orf60Q5U649 245 aa6.23□□□□□ -1.41
SPG11-208ENST00000558155 CXCL17Q6UXB2 119 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms