RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 DNAJC5GQ8N7S2 189 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 PLAGL2Q9UPG8 496 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 PLEKHG1Q9ULL1 1385 aa8.94□□□□□ -0.98
RTF1-204ENST00000558117 COL22A1Q8NFW1 1626 aaPredicted RBP8.94□□□□□ -0.98
RTF1-204ENST00000558117 SLC22A31A6NKX4 558 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 KIR3DL1P43629 444 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 VPS72Q15906 364 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 SPACA3Q8IXA5 215 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 SYT17Q9BSW7 474 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 TNKS2Q9H2K2 1166 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 ANTXR1Q9H6X2 564 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 CCSER2Q9H7U1 834 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 GINM1Q9NU53 330 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 OAS3Q9Y6K5 1087 aaKnown RBP8.93□□□□□ -0.98
RTF1-204ENST00000558117 PARD3Q8TEW0 1356 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 ARHGAP31Q2M1Z3 1444 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 LRRIQ1Q96JM4 1722 aa8.93□□□□□ -0.98
RTF1-204ENST00000558117 CFAP65Q6ZU64 1925 aaKnown RBP8.92□□□□□ -0.98
RTF1-204ENST00000558117 RGPD1P0DJD0 1748 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 SHANK3Q9BYB0 1731 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 ZNF865P0CJ78 1059 aaPredicted RBP8.92□□□□□ -0.98
RTF1-204ENST00000558117 BNIP3Q12983 259 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 ZNF574Q6ZN55 896 aaPredicted RBP8.92□□□□□ -0.98
RTF1-204ENST00000558117 ASB11Q8WXH4 323 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 GPRASP2Q96D09 838 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 CCDC74BQ96LY2 380 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 CEP131Q9UPN4 1083 aa8.92□□□□□ -0.98
RTF1-204ENST00000558117 LAMC1P11047 1609 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 PRR33A8MZF0 331 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 RAG1P15918 1043 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 GBP1P32455 592 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 GJA8P48165 433 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 IRAK1P51617 712 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 NKPD1Q17RQ9 610 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 NBPF8Q3BBV2 869 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 ANGEL2Q5VTE6 544 aaKnown RBP8.91□□□□□ -0.98
RTF1-204ENST00000558117 DNAJB8Q8NHS0 232 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 RASGRP4Q8TDF6 673 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 PPP1R13LQ8WUF5 828 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 PAK6Q9NQU5 681 aaPredicted RBP8.91□□□□□ -0.98
RTF1-204ENST00000558117 GMIPQ9P107 970 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 EFR3BQ9Y2G0 817 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 INPP5FQ9Y2H2 1132 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 CAPN6Q9Y6Q1 641 aa8.91□□□□□ -0.98
RTF1-204ENST00000558117 NRKQ7Z2Y5 1582 aa8.9□□□□□ -0.98
RTF1-204ENST00000558117 ADGRB3O60242 1522 aa8.9□□□□□ -0.98
RTF1-204ENST00000558117 PLCL1Q15111 1095 aa8.9□□□□□ -0.98
RTF1-204ENST00000558117 ARSHQ5FYA8 562 aa8.9□□□□□ -0.98
RTF1-204ENST00000558117 CDKAL1Q5VV42 579 aa8.9□□□□□ -0.98
RTF1-204ENST00000558117 PPT2Q9UMR5 302 aa8.9□□□□□ -0.98
RTF1-204ENST00000558117 TNS1Q9HBL0 1735 aaKnown RBP8.9□□□□□ -0.98
RTF1-204ENST00000558117 ZFYVE9O95405 1425 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 ADAMTS13Q76LX8 1427 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 PIK3R4Q99570 1358 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 CD8BP10966 210 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 OVOS1Q6IE37 1185 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 ABI1Q8IZP0 508 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 BAHD1Q8TBE0 780 aaPredicted RBP8.89□□□□□ -0.99
RTF1-204ENST00000558117 ATG4CQ96DT6 458 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 CAPN10Q9HC96 672 aa8.89□□□□□ -0.99
RTF1-204ENST00000558117 H3BS24 57 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 CD96P40200 585 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 IKZF1Q13422 519 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 LRRFIP1Q32MZ4 808 aaKnown RBP8.88□□□□□ -0.99
RTF1-204ENST00000558117 CCDC81Q6ZN84 652 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 NFXL1Q6ZNB6 911 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 SPRED2Q7Z698 418 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 PIWIL2Q8TC59 973 aaKnown RBP8.88□□□□□ -0.99
RTF1-204ENST00000558117 RNF141Q8WVD5 230 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 HSPA12BQ96MM6 686 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 KIF2CQ99661 725 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 KCNH3Q9ULD8 1083 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 ZNRF3Q9ULT6 936 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 C1orf167Q5SNV9 1468 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 MARF1Q9Y4F3 1742 aaKnown RBP8.88□□□□□ -0.99
RTF1-204ENST00000558117 GOLGB1Q14789 3259 aaKnown RBP8.88□□□□□ -0.99
RTF1-204ENST00000558117 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
RTF1-204ENST00000558117 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
RTF1-204ENST00000558117 PITPNM2Q9BZ72 1349 aa8.87□□□□□ -0.99
RTF1-204ENST00000558117 SOX9P48436 509 aa8.87□□□□□ -0.99
RTF1-204ENST00000558117 FBXW10Q5XX13 1052 aa8.87□□□□□ -0.99
RTF1-204ENST00000558117 FERD3LQ96RJ6 166 aa8.87□□□□□ -0.99
RTF1-204ENST00000558117 TRPM2O94759 1503 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 PCNTO95613 3336 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 MYOM1P52179 1685 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 RREB1Q92766 1687 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 IMPDH2P12268 514 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 NASPP49321 788 aaPredicted RBP8.86□□□□□ -0.99
RTF1-204ENST00000558117 TNK2Q07912 1038 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 CDCP2Q5VXM1 449 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 TMEM40Q8WWA1 233 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 SPATA32Q96LK8 384 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 ORAI2Q96SN7 254 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 CNNM2Q9H8M5 875 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 ADGRL3Q9HAR2 1447 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 CCNB3Q8WWL7 1395 aa8.86□□□□□ -0.99
RTF1-204ENST00000558117 NUP188Q5SRE5 1749 aa8.85□□□□□ -0.99
RTF1-204ENST00000558117 CCDC18Q5T9S5 1454 aa8.85□□□□□ -0.99
RTF1-204ENST00000558117 MEIS3P2A8K0S8 358 aa8.85□□□□□ -0.99
RTF1-204ENST00000558117 FUT4P22083 530 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms