RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 TIFAQ96CG3 184 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 TOX2Q96NM4 488 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 ZNF576Q9H609 170 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 SLC38A10Q9HBR0 1119 aa13.87□□□□□ -0.19
LGMN-219ENST00000557725 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
LGMN-219ENST00000557725 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
LGMN-219ENST00000557725 GPAA1O43292 621 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 TMEM63BQ5T3F8 832 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 GLT1D1Q96MS3 346 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 SEC62Q99442 399 aaKnown RBP13.86□□□□□ -0.19
LGMN-219ENST00000557725 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 MYO9BQ13459 2157 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 ASTN1O14525 1302 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 UMODL1Q5DID0 1318 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 LCTP09848 1927 aa13.86□□□□□ -0.19
LGMN-219ENST00000557725 TMEM265A0A087WTH1 108 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 ATP2A1O14983 1001 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 MS4A1P11836 297 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 CST5P28325 142 aaPredicted RBP13.85□□□□□ -0.19
LGMN-219ENST00000557725 CYP2C18P33260 490 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 TDO2P48775 406 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 GJA9P57773 515 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 CCDC129Q6ZRS4 1044 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
LGMN-219ENST00000557725 FAM126BQ8IXS8 530 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 MSL3Q8N5Y2 521 aaKnown RBP13.85□□□□□ -0.19
LGMN-219ENST00000557725 KBTBD3Q8NAB2 608 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 APPBP2Q92624 585 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 AGBL1Q96MI9 1066 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
LGMN-219ENST00000557725 PRDM12Q9H4Q4 367 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 ECHDC1Q9NTX5 307 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 MTMR4Q9NYA4 1195 aa13.85□□□□□ -0.19
LGMN-219ENST00000557725 ISY1Q9ULR0 285 aaKnown RBP13.85□□□□□ -0.19
LGMN-219ENST00000557725 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
LGMN-219ENST00000557725 A0A0U1RQG5 324 aaPredicted RBP13.84□□□□□ -0.19
LGMN-219ENST00000557725 SOWAHBA6NEL2 793 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 ARVCFO00192 962 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 RNF113AO15541 343 aaKnown RBP13.84□□□□□ -0.19
LGMN-219ENST00000557725 APPP05067 770 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 SLFN13Q68D06 897 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 PURBQ96QR8 312 aaKnown RBP13.84□□□□□ -0.19
LGMN-219ENST00000557725 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 INCENPQ9NQS7 918 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 CXXC1Q9P0U4 656 aaPredicted RBP13.84□□□□□ -0.19
LGMN-219ENST00000557725 FEM1BQ9UK73 627 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 ZNF536O15090 1300 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 ELP1O95163 1332 aa13.84□□□□□ -0.19
LGMN-219ENST00000557725 TMEM232C9JQI7 657 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 RBAK-RBAKDNI3L0D1 243 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 BMP3P12645 472 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 PPIGQ13427 754 aaKnown RBP eCLIP13.83□□□□□ -0.2
LGMN-219ENST00000557725 ADGRE1Q14246 886 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 CCDC85BQ15834 202 aaPredicted RBP13.83□□□□□ -0.2
LGMN-219ENST00000557725 RASIP1Q5U651 963 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 IFNL3Q8IZI9 196 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 ZNF444Q8N0Y2 327 aaPredicted RBP13.83□□□□□ -0.2
LGMN-219ENST00000557725 PCSK9Q8NBP7 692 aaKnown RBP13.83□□□□□ -0.2
LGMN-219ENST00000557725 MKL1Q969V6 931 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
LGMN-219ENST00000557725 PDGFCQ9NRA1 345 aa13.83□□□□□ -0.2
LGMN-219ENST00000557725 TTLL1O95922 423 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 CD4P01730 458 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 CCL23P55773 120 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 CCDC174Q6PII3 467 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 KCTD1Q719H9 257 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 NOL8Q76FK4 1167 aaKnown RBP13.82□□□□□ -0.2
LGMN-219ENST00000557725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.82□□□□□ -0.2
LGMN-219ENST00000557725 EEPD1Q7L9B9 569 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 FAM133AQ8N9E0 248 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 GMCL1P1Q8NEA9 526 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 CHST13Q8NET6 341 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 OTUD7AQ8TE49 926 aaPredicted RBP13.82□□□□□ -0.2
LGMN-219ENST00000557725 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 SPC25Q9HBM1 224 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 RNF146Q9NTX7 359 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 RAPGEFL1Q9UHV5 662 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 RCAN3Q9UKA8 241 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 YBX2Q9Y2T7 364 aaKnown RBP13.82□□□□□ -0.2
LGMN-219ENST00000557725 GRIN2DO15399 1336 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 MROH7Q68CQ1 1323 aa13.82□□□□□ -0.2
LGMN-219ENST00000557725 NMT2O60551 498 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 TSPY3P0CV98 308 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 TSPY8P0CW00 308 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 ALAS1P13196 640 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 SMPD1P17405 629 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 MCCP23508 829 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 PSMC6P62333 389 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 TFAP4Q01664 338 aa13.81□□□□□ -0.2
LGMN-219ENST00000557725 TNFAIP2Q03169 654 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms