RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 VMACQ2NL98 169 aa4.97□□□□□ -1.61
GPHN-216ENST00000557678 USP48Q86UV5 1035 aa4.97□□□□□ -1.61
GPHN-216ENST00000557678 SLITRK4Q8IW52 837 aa4.97□□□□□ -1.61
GPHN-216ENST00000557678 C7orf61Q8IZ16 206 aa4.97□□□□□ -1.61
GPHN-216ENST00000557678 ERVK13-1Q9NX77 482 aa4.97□□□□□ -1.61
GPHN-216ENST00000557678 SUCOQ9UBS9 1254 aaKnown RBP4.97□□□□□ -1.61
GPHN-216ENST00000557678 A0A1W2PQ45 241 aaPredicted RBP4.96□□□□□ -1.62
GPHN-216ENST00000557678 A0A1W2PQY0 241 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 MEIS3P2A8K0S8 358 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 SASH1O94885 1247 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 ZNF205O95201 554 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 TP53P04637 393 aaPredicted RBP4.96□□□□□ -1.62
GPHN-216ENST00000557678 GSNP06396 782 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 CTSKP43235 329 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 BRF1Q92994 677 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 RELTQ969Z4 430 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 CNTD2Q9H8S5 307 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 IMPACTQ9P2X3 320 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 RAPGEFL1Q9UHV5 662 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 PCDHGB7Q9Y5F8 929 aa4.96□□□□□ -1.62
GPHN-216ENST00000557678 C9IYK1 514 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 HRKO00198 91 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 IMPDH2P12268 514 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 CDR1P51861 262 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 NCKAP1LP55160 1127 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 ERVFRD-1P60508 538 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 ZNF394Q53GI3 561 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 DCAF15Q66K64 600 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 CNKSR3Q6P9H4 555 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 RGS22Q8NE09 1264 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 MZB1Q8WU39 189 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 KLHL14Q9P2G3 628 aa4.95□□□□□ -1.62
GPHN-216ENST00000557678 H0Y8X5 98 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 TRIM13O60858 407 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 ACRP10323 421 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 ZNF16P17020 682 aaPredicted RBP4.94□□□□□ -1.62
GPHN-216ENST00000557678 NOP2P46087 812 aaKnown RBP4.94□□□□□ -1.62
GPHN-216ENST00000557678 YBX1P67809 324 aaKnown RBP4.94□□□□□ -1.62
GPHN-216ENST00000557678 HLA-DQA1Q5Y7H0 255 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 INTS3Q68E01 1043 aaKnown RBP4.94□□□□□ -1.62
GPHN-216ENST00000557678 ZDHHC14Q8IZN3 488 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 MARCH10Q8NA82 808 aaPredicted RBP4.94□□□□□ -1.62
GPHN-216ENST00000557678 JMJD8Q96S16 334 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 DBR1Q9UK59 544 aaKnown RBP4.94□□□□□ -1.62
GPHN-216ENST00000557678 ZNRF3Q9ULT6 936 aa4.94□□□□□ -1.62
GPHN-216ENST00000557678 CD3EP07766 207 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 PMS1P54277 932 aaKnown RBP4.93□□□□□ -1.62
GPHN-216ENST00000557678 NFIXQ14938 502 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 TMCO4Q5TGY1 634 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 BICRALQ6AI39 1079 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 RUFY4Q6ZNE9 571 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 LDHDQ86WU2 507 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 FIBCD1Q8N539 461 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 SMARCC1Q92922 1105 aaPredicted RBP4.93□□□□□ -1.62
GPHN-216ENST00000557678 C20orf173Q96LM9 149 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 ZDHHC15Q96MV8 337 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 PWWP2AQ96N64 755 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 CRBNQ96SW2 442 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 TM9SF2Q99805 663 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 BACH2Q9BYV9 841 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 NOL6Q9H6R4 1146 aaKnown RBP4.93□□□□□ -1.62
GPHN-216ENST00000557678 PRR13Q9NZ81 148 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 PPT2Q9UMR5 302 aa4.93□□□□□ -1.62
GPHN-216ENST00000557678 SF3B6Q9Y3B4 125 aaKnown RBP4.93□□□□□ -1.62
GPHN-216ENST00000557678 BUB1BO60566 1050 aaPredicted RBP4.92□□□□□ -1.62
GPHN-216ENST00000557678 ITGA4P13612 1032 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 PFKLP17858 780 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 TACR1P25103 407 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 ZNF200P98182 395 aaPredicted RBP4.92□□□□□ -1.62
GPHN-216ENST00000557678 PPP2R5DQ14738 602 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 TCEAL1Q15170 157 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 RTP2Q5QGT7 225 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 AXDND1Q5T1B0 1012 aaPredicted RBP4.92□□□□□ -1.62
GPHN-216ENST00000557678 ZC3H14Q6PJT7 736 aaKnown RBP4.92□□□□□ -1.62
GPHN-216ENST00000557678 RPTNQ6XPR3 784 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 UNC5AQ6ZN44 842 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 CCDC81Q6ZN84 652 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 PPFIBP1Q86W92 1011 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 TMEM52Q8NDY8 209 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 RNF34Q969K3 372 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 DACT3Q96B18 629 aaPredicted RBP4.92□□□□□ -1.62
GPHN-216ENST00000557678 KCNC2Q96PR1 638 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 SLC12A9Q9BXP2 914 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 GP6Q9HCN6 339 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 TNFRSF12AQ9NP84 129 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 ACSL6Q9UKU0 697 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 JAG2Q9Y219 1238 aa4.92□□□□□ -1.62
GPHN-216ENST00000557678 A0A0G2JLL6 359 aaPredicted RBP4.91□□□□□ -1.62
GPHN-216ENST00000557678 ZBTB7CA1YPR0 619 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 SHOXO15266 292 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 TBC1D8O95759 1140 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 CD247P20963 164 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 GUCY2CP25092 1073 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 ZNF445P59923 1031 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 POU4F1Q01851 419 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 NR1I3Q14994 352 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 ZYXQ15942 572 aaKnown RBP4.91□□□□□ -1.62
GPHN-216ENST00000557678 CYP2R1Q6VVX0 501 aa4.91□□□□□ -1.62
GPHN-216ENST00000557678 FAM129CQ86XR2 697 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms