RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 GUCA1BQ9UMX6 200 aa18.27■□□□□ 0.52
SHMT2-232ENST00000557487 MYH8P13535 1937 aa18.27■□□□□ 0.52
SHMT2-232ENST00000557487 TTC26A0AVF1 554 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 WNT7AO00755 349 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 PSMA7O14818 248 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 KIF5BP33176 963 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 PRCPP42785 496 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 CCDC70Q6NSX1 233 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 PROM2Q8N271 834 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 TSGA10Q9BZW7 698 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 CUEDC2Q9H467 287 aa18.27■□□□□ 0.51
SHMT2-232ENST00000557487 BTAF1O14981 1849 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
SHMT2-232ENST00000557487 RNF225M0QZC1 329 aaPredicted RBP18.26■□□□□ 0.51
SHMT2-232ENST00000557487 CCDC122Q5T0U0 273 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 NCAPH2Q6IBW4 605 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 FAM114A1Q8IWE2 563 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 DHTKD1Q96HY7 919 aaPredicted RBP18.26■□□□□ 0.51
SHMT2-232ENST00000557487 CHP1Q99653 195 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 DISC1Q9NRI5 854 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.26■□□□□ 0.51
SHMT2-232ENST00000557487 LAMB2P55268 1798 aa18.26■□□□□ 0.51
SHMT2-232ENST00000557487 EIF3CLB5ME19 914 aaKnown RBP18.25■□□□□ 0.51
SHMT2-232ENST00000557487 LAD1O00515 517 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 N4BP1O75113 896 aaKnown RBP18.25■□□□□ 0.51
SHMT2-232ENST00000557487 SRGNP10124 158 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 CDC25AP30304 524 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 ITIH3Q06033 890 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 FIGNQ5HY92 759 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 SUSD4Q5VX71 490 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 IRF2BP1Q8IU81 584 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 AFAP1L1Q8TED9 768 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
SHMT2-232ENST00000557487 EIF3CQ99613 913 aaKnown RBP18.25■□□□□ 0.51
SHMT2-232ENST00000557487 RHOBTB3O94955 611 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 ABL1P00519 1130 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 MCM7P33993 719 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 CHRNDQ07001 517 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 KIAA1328Q86T90 577 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 SRBD1Q8N5C6 995 aaKnown RBP18.25■□□□□ 0.51
SHMT2-232ENST00000557487 C4orf32Q8N8J7 132 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 COG1Q8WTW3 980 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 STAMQ92783 540 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 SLC4A9Q96Q91 983 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 CCSER1Q9C0I3 900 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 FAM107BQ9H098 131 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 MYH13Q9UKX3 1938 aa18.25■□□□□ 0.51
SHMT2-232ENST00000557487 A0A1W2PQJ5 194 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 BICDL2A1A5D9 508 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 RNF40O75150 1001 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 HERVK_113P62684 666 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 UBE4AQ14139 1066 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 IL17AQ16552 155 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 TXNRD1Q16881 649 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 JAKMIP2Q96AA8 810 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 FAM204AQ9H8W3 233 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 HPCAL4Q9UM19 191 aa18.24■□□□□ 0.51
SHMT2-232ENST00000557487 PPFIA4O75335 1185 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
SHMT2-232ENST00000557487 ZBED6P86452 979 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 ADGRA1Q86SQ6 560 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 BLIDQ8IZY5 108 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 GIMAP8Q8ND71 665 aaPredicted RBP18.23■□□□□ 0.51
SHMT2-232ENST00000557487 PURBQ96QR8 312 aaKnown RBP18.23■□□□□ 0.51
SHMT2-232ENST00000557487 TRIM34Q9BYJ4 488 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 EXOC1Q9NV70 894 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 GDAQ9Y2T3 454 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 PRPF6O94906 941 aaKnown RBP18.23■□□□□ 0.51
SHMT2-232ENST00000557487 MAGEA9P43362 315 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 WDR59Q6PJI9 974 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 DTHD1Q6ZMT9 781 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 TRIM47Q96LD4 638 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 TTYH3Q9C0H2 523 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 ABCF2Q9UG63 623 aa18.23■□□□□ 0.51
SHMT2-232ENST00000557487 CACNA1SQ13698 1873 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 hCG_1642624A0A1W2PR95 340 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 SYF2O95926 243 aaKnown RBP18.22■□□□□ 0.51
SHMT2-232ENST00000557487 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-232ENST00000557487 PRPHP41219 470 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 TNNT3P45378 269 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-232ENST00000557487 GNAQP50148 359 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 ZNF572Q7Z3I7 529 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-232ENST00000557487 DAGLBQ8NCG7 672 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 CRACR2AQ9BSW2 395 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 KBTBD4Q9NVX7 518 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 PCDHA4Q9UN74 947 aa18.22■□□□□ 0.51
SHMT2-232ENST00000557487 CICQ96RK0 1608 aaPredicted RBP18.22■□□□□ 0.51
SHMT2-232ENST00000557487 SNAP23O00161 211 aa18.21■□□□□ 0.51
SHMT2-232ENST00000557487 ATP1A1P05023 1023 aaKnown RBP18.21■□□□□ 0.51
SHMT2-232ENST00000557487 PRLRP16471 622 aa18.21■□□□□ 0.51
SHMT2-232ENST00000557487 SBK1Q52WX2 424 aa18.21■□□□□ 0.51
SHMT2-232ENST00000557487 COBLL1Q53SF7 1204 aa18.21■□□□□ 0.51
SHMT2-232ENST00000557487 CCDC178Q5BJE1 867 aa18.21■□□□□ 0.51
SHMT2-232ENST00000557487 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
SHMT2-232ENST00000557487 TTI2Q6NXR4 508 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms