RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 TIMP1P01033 207 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 TSPY3P0CV98 308 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 TSPY8P0CW00 308 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 FDX1P10109 184 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 BMP3P12645 472 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 FOSL2P15408 326 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 IRX5P78411 483 aaPredicted RBP20.35■□□□□ 0.85
NEDD1-210ENST00000557400 PDE4BQ07343 736 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 CCDC144BQ3MJ40 725 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 SLFN13Q68D06 897 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 ARMCX2Q7L311 632 aa20.35■□□□□ 0.85
NEDD1-210ENST00000557400 UPF3AQ9H1J1 476 aaKnown RBP20.35■□□□□ 0.85
NEDD1-210ENST00000557400 ASGR1P07306 291 aa20.34■□□□□ 0.85
NEDD1-210ENST00000557400 SLC3A2P08195 630 aaKnown RBP20.34■□□□□ 0.85
NEDD1-210ENST00000557400 CDK7P50613 346 aa20.34■□□□□ 0.85
NEDD1-210ENST00000557400 GJA9P57773 515 aa20.34■□□□□ 0.85
NEDD1-210ENST00000557400 HOMER2Q9NSB8 354 aa20.34■□□□□ 0.85
NEDD1-210ENST00000557400 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
NEDD1-210ENST00000557400 TTC41PQ6P2S7 1318 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 PLXNA1Q9UIW2 1896 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 SMCHD1A6NHR9 2005 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.33■□□□□ 0.85
NEDD1-210ENST00000557400 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.33■□□□□ 0.85
NEDD1-210ENST00000557400 TMEM232C9JQI7 657 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 DNAJB2P25686 324 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 STAT2P52630 851 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 TFAP4Q01664 338 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 GNASQ5JWF2 1037 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 MFSD5Q6N075 450 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 CCDC144CPQ8IYA2 1237 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 GMCL1Q96IK5 515 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 NAPBQ9H115 298 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 ACAD9Q9H845 621 aa20.33■□□□□ 0.85
NEDD1-210ENST00000557400 EYSQ5T1H1 3165 aa20.33■□□□□ 0.84
NEDD1-210ENST00000557400 ZNFX1Q9P2E3 1918 aaKnown RBP20.33■□□□□ 0.84
NEDD1-210ENST00000557400 A0A0U1RQG5 324 aaPredicted RBP20.32■□□□□ 0.84
NEDD1-210ENST00000557400 ARVCFO00192 962 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 ERC2O15083 957 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 CNTN2Q02246 1040 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 PPARAQ07869 468 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 FAM160B2Q86V87 743 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 FAM133AQ8N9E0 248 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 CHURC1Q8WUH1 139 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 SEC62Q99442 399 aaKnown RBP20.32■□□□□ 0.84
NEDD1-210ENST00000557400 KATNBL1Q9H079 304 aa20.32■□□□□ 0.84
NEDD1-210ENST00000557400 SLC1A4P43007 532 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 NKX3-2P78367 333 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 IKQ13123 557 aaPredicted RBP20.31■□□□□ 0.84
NEDD1-210ENST00000557400 PPIGQ13427 754 aaKnown RBP eCLIP20.31■□□□□ 0.84
NEDD1-210ENST00000557400 PPP4R3BQ5MIZ7 849 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 CCDC174Q6PII3 467 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 PI4K2BQ8TCG2 481 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.31■□□□□ 0.84
NEDD1-210ENST00000557400 FSD1Q9BTV5 496 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 A1CFQ9NQ94 594 aaKnown RBP20.31■□□□□ 0.84
NEDD1-210ENST00000557400 RNF146Q9NTX7 359 aa20.31■□□□□ 0.84
NEDD1-210ENST00000557400 CTAGE5O15320 804 aa20.3■□□□□ 0.84
NEDD1-210ENST00000557400 TKFCQ3LXA3 575 aa20.3■□□□□ 0.84
NEDD1-210ENST00000557400 ZMYM1Q5SVZ6 1142 aa20.3■□□□□ 0.84
NEDD1-210ENST00000557400 FAM126BQ8IXS8 530 aa20.3■□□□□ 0.84
NEDD1-210ENST00000557400 STAG1Q8WVM7 1258 aa20.3■□□□□ 0.84
NEDD1-210ENST00000557400 AGBL1Q96MI9 1066 aa20.3■□□□□ 0.84
NEDD1-210ENST00000557400 ZNF536O15090 1300 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 ASB14A6NK59 587 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 TLR3O15455 904 aaKnown RBP20.29■□□□□ 0.84
NEDD1-210ENST00000557400 PLA2G6O60733 806 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 MCCP23508 829 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 TNFAIP2Q03169 654 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 GRIN2CQ14957 1233 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 TMEM199Q8N511 208 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 TIFAQ96CG3 184 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 CDH23Q9H251 3354 aa20.29■□□□□ 0.84
NEDD1-210ENST00000557400 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.28■□□□□ 0.84
NEDD1-210ENST00000557400 SOWAHBA6NEL2 793 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 CSF2RAP15509 400 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 TMEM240Q5SV17 173 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 NOL8Q76FK4 1167 aaKnown RBP20.28■□□□□ 0.84
NEDD1-210ENST00000557400 C16orf59Q7L2K0 433 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 OTUD7AQ8TE49 926 aaPredicted RBP20.28■□□□□ 0.84
NEDD1-210ENST00000557400 TRERF1Q96PN7 1200 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 PPP1R12CQ9BZL4 782 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 ZNF576Q9H609 170 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 STX8Q9UNK0 236 aa20.28■□□□□ 0.84
NEDD1-210ENST00000557400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.28■□□□□ 0.84
NEDD1-210ENST00000557400 TSPY2A6NKD2 308 aa20.27■□□□□ 0.84
NEDD1-210ENST00000557400 ALAS1P13196 640 aa20.27■□□□□ 0.84
NEDD1-210ENST00000557400 BEX3Q00994 111 aa20.27■□□□□ 0.84
NEDD1-210ENST00000557400 RASIP1Q5U651 963 aa20.27■□□□□ 0.84
NEDD1-210ENST00000557400 PSRC1Q6PGN9 363 aaPredicted RBP20.27■□□□□ 0.84
NEDD1-210ENST00000557400 TLK2Q86UE8 772 aa20.27■□□□□ 0.84
NEDD1-210ENST00000557400 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.84
NEDD1-210ENST00000557400 GNEQ9Y223 722 aaKnown RBP20.27■□□□□ 0.84
NEDD1-210ENST00000557400 ASTN1O14525 1302 aa20.27■□□□□ 0.83
NEDD1-210ENST00000557400 VCANP13611 3396 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 FOXP2O15409 715 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 CABYRO75952 493 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 CD4P01730 458 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 RCSD1Q6JBY9 416 aa20.26■□□□□ 0.83
NEDD1-210ENST00000557400 CXCL17Q6UXB2 119 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms