RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 CAMTA1Q9Y6Y1 1673 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 MYH8P13535 1937 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 GOLGA6L7A0A1B0GV03 622 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 KCNQ3O43525 872 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 PRC1O43663 620 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 HSF2BPO75031 334 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 RFX5P48382 616 aaPredicted RBP11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 HERVK_113P62684 666 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 TFCP2Q12800 502 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 TAX1BP1Q86VP1 789 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 NLRP14Q86W24 1093 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 C3orf20Q8ND61 904 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 CAPZA3Q96KX2 299 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 AIFM3Q96NN9 605 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 CCT8L2Q96SF2 557 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 CHP1Q99653 195 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 IRAK4Q9NWZ3 460 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 RABL2BQ9UNT1 228 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 MAST3O60307 1309 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 RGPD2P0DJD1 1756 aa11.66□□□□□ -0.54
SUPT16H-207ENST00000557394 ANTXR2P58335 489 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 C2orf54Q08AI8 447 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 IFFO1Q0D2I5 559 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 PSMD2Q13200 908 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 PROSER3Q2NL68 480 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 CD302Q8IX05 232 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 MRRFQ96E11 262 aaKnown RBP11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 NWD2Q9ULI1 1742 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 KRT9P35527 623 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 ADCY2Q08462 1091 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 GRAMD1CQ8IYS0 662 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 TAF4BQ92750 862 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 ZIM3Q96PE6 472 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 PURBQ96QR8 312 aaKnown RBP11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 RUFY1Q96T51 708 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 RETREG1Q9H6L5 497 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 BATF3Q9NR55 127 aa11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 DMGDHQ9UI17 866 aaKnown RBP11.65□□□□□ -0.54
SUPT16H-207ENST00000557394 HEG1Q9ULI3 1381 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CDC25AP30304 524 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 EVA1CP58658 441 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 PTPN12Q05209 780 aaKnown RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 GRIN1Q05586 938 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 KRT31Q15323 416 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 AMOTQ4VCS5 1084 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 EPHA10Q5JZY3 1008 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 SPECC1Q5M775 1068 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CCDC122Q5T0U0 273 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CDCA2Q69YH5 1023 aaPredicted RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CEP57Q86XR8 500 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 SH2D3CQ8N5H7 860 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 HOOK2Q96ED9 719 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CCDC114Q96M63 670 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 NEUROD6Q96NK8 337 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 MYO5AQ9Y4I1 1855 aaKnown RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 PPP1R3GB7ZBB8 358 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 ZNF185O15231 689 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 OATP04181 439 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 IGKV5-2P06315 115 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 TGFB3P10600 412 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 MDH1P40925 334 aaKnown RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 ATP1A2P50993 1020 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 GUCY1A3Q02108 690 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 MECOMQ03112 1051 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 XRCC4Q13426 336 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 LACTB2Q53H82 288 aaPredicted RBP11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 TTLL7Q6ZT98 887 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 CREG2Q8IUH2 290 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 AIDAQ96BJ3 306 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 LRRC1Q9BTT6 524 aa11.64□□□□□ -0.55
SUPT16H-207ENST00000557394 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 TIMM44O43615 452 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 MGRN1O60291 552 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 CDKL5O76039 1030 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 A1BGP04217 495 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 STX17P56962 302 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 POU5F1Q01860 360 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 EZH2Q15910 746 aaKnown RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 PPP4R3AQ6IN85 833 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 CCDC121Q6ZUS5 278 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 SH3RF1Q7Z6J0 888 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 HDAC7Q8WUI4 952 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 LTV1Q96GA3 475 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 DNAJC7Q99615 494 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 SH3GL3Q99963 347 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 INO80BQ9C086 356 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 PRDM11Q9NQV5 511 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 PAG1Q9NWQ8 432 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 AXIN2Q9Y2T1 843 aa11.63□□□□□ -0.55
SUPT16H-207ENST00000557394 DNM1LO00429 736 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms