RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 A0A1W2PQ45 241 aaPredicted RBP7.27□□□□□ -1.25
VRK1-207ENST00000557352 A0A1W2PQY0 241 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 ERVFRD-1P60508 538 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 YBX1P67809 324 aaKnown RBP7.27□□□□□ -1.25
VRK1-207ENST00000557352 COL9A2Q14055 689 aaPredicted RBP7.27□□□□□ -1.25
VRK1-207ENST00000557352 NOL9Q5SY16 702 aaKnown RBP7.27□□□□□ -1.25
VRK1-207ENST00000557352 BRF1Q92994 677 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 SLC12A9Q9BXP2 914 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 IRF2BPLQ9H1B7 796 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 GP6Q9HCN6 339 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 FAM86C1Q9NVL1 165 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 RAPGEFL1Q9UHV5 662 aa7.27□□□□□ -1.25
VRK1-207ENST00000557352 MBD1Q9UIS9 605 aaPredicted RBP7.27□□□□□ -1.25
VRK1-207ENST00000557352 H0Y8X5 98 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 GSTM1P09488 218 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 CD247P20963 164 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 VIPR1P32241 457 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 CWF19L1Q69YN2 538 aaKnown RBP7.26□□□□□ -1.25
VRK1-207ENST00000557352 SIRT5Q9NXA8 310 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 ACSL6Q9UKU0 697 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 ZNF214Q9UL59 606 aaPredicted RBP7.26□□□□□ -1.25
VRK1-207ENST00000557352 CNOT6Q9ULM6 557 aaKnown RBP7.26□□□□□ -1.25
VRK1-207ENST00000557352 EFR3BQ9Y2G0 817 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 ZNF451Q9Y4E5 1061 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 FHOD1Q9Y613 1164 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
VRK1-207ENST00000557352 INHBBP09529 407 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 PRKCAP17252 672 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 SOX9P48436 509 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 LAPTM5Q13571 262 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 FIBCD1Q8N539 461 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 SPATA32Q96LK8 384 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 JMJD8Q96S16 334 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 SRRTQ9BXP5 876 aaKnown RBP7.25□□□□□ -1.25
VRK1-207ENST00000557352 KCTD3Q9Y597 815 aa7.25□□□□□ -1.25
VRK1-207ENST00000557352 MPOP05164 745 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 ARL4AP40617 200 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 CYP4F8P98187 520 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 SSPNQ14714 243 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 NUP43Q8NFH3 380 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 RASGRP4Q8TDF6 673 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 CRBNQ96SW2 442 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 CNTD2Q9H8S5 307 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 KLHL14Q9P2G3 628 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 IMPACTQ9P2X3 320 aa7.24□□□□□ -1.25
VRK1-207ENST00000557352 ABLIM1O14639 778 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 CBFA2T2O43439 604 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 ITGA4P13612 1032 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 EPHB3P54753 998 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 EIF6P56537 245 aaKnown RBP7.23□□□□□ -1.25
VRK1-207ENST00000557352 HDLBPQ00341 1268 aaKnown RBP7.23□□□□□ -1.25
VRK1-207ENST00000557352 NT5DC4Q86YG4 428 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 HOMEZQ8IX15 550 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 NAT16Q8N8M0 369 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 GPRASP2Q96D09 838 aa7.23□□□□□ -1.25
VRK1-207ENST00000557352 MRRFQ96E11 262 aaKnown RBP7.23□□□□□ -1.25
VRK1-207ENST00000557352 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.23□□□□□ -1.25
VRK1-207ENST00000557352 FGF10O15520 208 aaPredicted RBP7.22□□□□□ -1.25
VRK1-207ENST00000557352 NOP2P46087 812 aaKnown RBP7.22□□□□□ -1.25
VRK1-207ENST00000557352 GIPRP48546 466 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 ZNF385BQ569K4 471 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 C9orf131Q5VYM1 1079 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 HLA-DQA1Q5Y7H0 255 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 OLFML2BQ68BL8 750 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 SIGLEC10Q96LC7 697 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 FCRL3Q96P31 734 aaPredicted RBP7.22□□□□□ -1.25
VRK1-207ENST00000557352 NOL6Q9H6R4 1146 aaKnown RBP7.22□□□□□ -1.25
VRK1-207ENST00000557352 TNFRSF12AQ9NP84 129 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 SF3B6Q9Y3B4 125 aaKnown RBP7.22□□□□□ -1.25
VRK1-207ENST00000557352 ADAMTS20P59510 1910 aa7.22□□□□□ -1.25
VRK1-207ENST00000557352 A0A087WZG4 1122 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 NUDT19A8MXV4 375 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 N4BP3O15049 544 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 GJA8P48165 433 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 MVKQ03426 396 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 RAB3GAP1Q15042 981 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 TCEAL1Q15170 157 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 GNPTABQ3T906 1256 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 KIAA1522Q9P206 1035 aaPredicted RBP7.21□□□□□ -1.26
VRK1-207ENST00000557352 IRAK3Q9Y616 596 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 SLC12A7Q9Y666 1083 aa7.21□□□□□ -1.26
VRK1-207ENST00000557352 A0A1W2PQH9 124 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 RFXAPO00287 272 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 MSL3P1P0C860 447 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 IFNGR1P15260 489 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 PI3P19957 117 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 HOXA5P20719 270 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 CDR1P51861 262 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 POU4F1Q01851 419 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 TMC6Q7Z403 805 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 JAMLQ86YT9 394 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 C19orf47Q8N9M1 422 aaKnown RBP7.2□□□□□ -1.26
VRK1-207ENST00000557352 OR6P1Q8NGX9 317 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 PANK1Q8TE04 598 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 C20orf173Q96LM9 149 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 ZDHHC15Q96MV8 337 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 HAUS7Q99871 368 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 KRTAP4-11Q9BYQ6 195 aa7.2□□□□□ -1.26
VRK1-207ENST00000557352 PHAXQ9H814 394 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms