RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 ADAMTS4O75173 837 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 ZFYP08048 801 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 TLE2Q04725 743 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 SHHQ15465 462 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 PRPF38AQ8NAV1 312 aaKnown RBP13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 GUCD1Q96NT3 240 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 TEX13BQ9BXU2 312 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
HNRNPC-231ENST00000557336 ADCY6O43306 1168 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 GNAT2P19087 354 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 EPHB4P54760 987 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 FAM109BQ6ICB4 259 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 MAMDC4Q6UXC1 1216 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 NEDD1Q8NHV4 660 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 BADQ92934 168 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 INCENPQ9NQS7 918 aa13.33□□□□□ -0.28
HNRNPC-231ENST00000557336 RARBP10826 455 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 COPB2P35606 906 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 TDO2P48775 406 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 CPXCR1Q8N123 301 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 LRRC47Q8N1G4 583 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 GMCL1P1Q8NEA9 526 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 GPATCH3Q96I76 525 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
HNRNPC-231ENST00000557336 A0A1W2PQ45 241 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 A0A1W2PQY0 241 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 MYADML2A6NDP7 307 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 APPP05067 770 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 CCDC129Q6ZRS4 1044 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 ZNF444Q8N0Y2 327 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 ZNF536O15090 1300 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 SYNGAP1Q96PV0 1343 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 PLXNA1Q9UIW2 1896 aa13.31□□□□□ -0.28
HNRNPC-231ENST00000557336 DLL1O00548 723 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 KIAA0355O15063 1070 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 CTAGE5O15320 804 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 ZBED4O75132 1171 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 TTLL1O95922 423 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 AKR1A1P14550 325 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 ACLYP53396 1101 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 TFAP4Q01664 338 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 PPARAQ07869 468 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 SLFN13Q68D06 897 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 RASGRP2Q7LDG7 609 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 RNF180Q86T96 592 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 PRKAG2Q9UGJ0 569 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
HNRNPC-231ENST00000557336 NMT2O60551 498 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 BMP3P12645 472 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 NOVP48745 357 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 SLC4A3P48751 1232 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 CNTN2Q02246 1040 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 FAAP100Q0VG06 881 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 ACVR2BQ13705 512 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 KCNA10Q16322 511 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 ANKRD33Q7Z3H0 272 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 FAM161BQ96MY7 647 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 TSEN34Q9BSV6 310 aaKnown RBP13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 CNPY2Q9Y2B0 182 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 ASTN1O14525 1302 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 CHD7Q9P2D1 2997 aa13.29□□□□□ -0.28
HNRNPC-231ENST00000557336 TTC28Q96AY4 2481 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 DUSP11O75319 330 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 CLTBP09497 229 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 MX1P20591 662 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 CDK7P50613 346 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 OAZ1P54368 228 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 CTDSPL2Q05D32 466 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 FAM133AQ8N9E0 248 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 CHST13Q8NET6 341 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 GMCL1Q96IK5 515 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 AGBL1Q96MI9 1066 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 FSD1Q9BTV5 496 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 NAPBQ9H115 298 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 TTYH1Q9H313 450 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-231ENST00000557336 FAM184BQ9ULE4 1060 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms