RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 SEPT4O43236 478 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 FDX1P10109 184 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 PDHBP11177 359 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 PTH1RQ03431 593 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 SYDE2Q5VT97 1194 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 IQCA1Q86XH1 822 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 TRERF1Q96PN7 1200 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 ACAD9Q9H845 621 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 CCPG1Q9ULG6 757 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 CNPY2Q9Y2B0 182 aa19.45■□□□□ 0.7
VSX1-207ENST00000557285 DIS3Q9Y2L1 958 aaKnown RBP19.45■□□□□ 0.7
VSX1-207ENST00000557285 LENG1Q96BZ8 264 aaPredicted RBP19.44■□□□□ 0.7
VSX1-207ENST00000557285 TTC14Q96N46 770 aa19.44■□□□□ 0.7
VSX1-207ENST00000557285 SENP6Q9GZR1 1112 aaPredicted RBP19.44■□□□□ 0.7
VSX1-207ENST00000557285 ZSWIM5Q9P217 1185 aa19.44■□□□□ 0.7
VSX1-207ENST00000557285 PCDH10Q9P2E7 1040 aa19.44■□□□□ 0.7
VSX1-207ENST00000557285 ZHX1Q9UKY1 873 aaPredicted RBP19.44■□□□□ 0.7
VSX1-207ENST00000557285 ZMYND8Q9ULU4 1186 aaPredicted RBP19.44■□□□□ 0.7
VSX1-207ENST00000557285 DNAH12Q6ZR08 3092 aa19.44■□□□□ 0.7
VSX1-207ENST00000557285 DNAJC25-GNG10A0A024R161 153 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 PLA2G6O60733 806 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 GOLGA8HP0CJ92 632 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 CNTN2Q02246 1040 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 MUM1L1Q5H9M0 696 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 HABP4Q5JVS0 413 aaKnown RBP19.43■□□□□ 0.7
VSX1-207ENST00000557285 ZSCAN10Q96SZ4 725 aaPredicted RBP19.43■□□□□ 0.7
VSX1-207ENST00000557285 UBAC1Q9BSL1 405 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 KRT23Q9C075 422 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 KAT14Q9H8E8 782 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 TNKSO95271 1327 aa19.43■□□□□ 0.7
VSX1-207ENST00000557285 KBTBD13C9JR72 458 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 DNM1LO00429 736 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 COL6A1P12109 1028 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 SYN1P17600 705 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 ATN1P54259 1190 aaPredicted RBP19.42■□□□□ 0.7
VSX1-207ENST00000557285 ZNF543Q08ER8 600 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 LRRC26Q2I0M4 334 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 ENAHQ8N8S7 591 aaPredicted RBP19.42■□□□□ 0.7
VSX1-207ENST00000557285 PNMA1Q8ND90 353 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 CPVLQ9H3G5 476 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 CNNM2Q9H8M5 875 aa19.42■□□□□ 0.7
VSX1-207ENST00000557285 A1CFQ9NQ94 594 aaKnown RBP19.42■□□□□ 0.7
VSX1-207ENST00000557285 POTEB2H3BUK9 544 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 RARBP10826 455 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 TKFCQ3LXA3 575 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 NSMFQ6X4W1 530 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 CENPQQ7L2Z9 268 aaPredicted RBP19.41■□□□□ 0.7
VSX1-207ENST00000557285 DGKHQ86XP1 1220 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 ARRDC4Q8NCT1 418 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 RANBP17Q9H2T7 1088 aaKnown RBP19.41■□□□□ 0.7
VSX1-207ENST00000557285 XPNPEP3Q9NQH7 507 aa19.41■□□□□ 0.7
VSX1-207ENST00000557285 SGSM2O43147 1006 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 SNAI1O95863 264 aaPredicted RBP19.4■□□□□ 0.7
VSX1-207ENST00000557285 PGK1P00558 417 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 ICAM1P05362 532 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 ZNF865P0CJ78 1059 aaPredicted RBP19.4■□□□□ 0.7
VSX1-207ENST00000557285 CCDC178Q5BJE1 867 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 BTNL9Q6UXG8 535 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 FERMT2Q96AC1 680 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 FGD4Q96M96 766 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 UBA5Q9GZZ9 404 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.4■□□□□ 0.7
VSX1-207ENST00000557285 NRBP1Q9UHY1 535 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 DDX49Q9Y6V7 483 aaKnown RBP19.4■□□□□ 0.7
VSX1-207ENST00000557285 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
VSX1-207ENST00000557285 SYNGAP1Q96PV0 1343 aa19.4■□□□□ 0.7
VSX1-207ENST00000557285 CYP21A2P08686 494 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 AKR1A1P14550 325 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 TRDNQ13061 729 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 LRRC41Q15345 812 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 CYB5R4Q7L1T6 521 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 ARMCX2Q7L311 632 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 CCDC144CPQ8IYA2 1237 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 RBM27Q9P2N5 1060 aaKnown RBP19.39■□□□□ 0.69
VSX1-207ENST00000557285 TAF6LQ9Y6J9 622 aa19.39■□□□□ 0.69
VSX1-207ENST00000557285 SNHG28P0DPA3 235 aa19.38■□□□□ 0.69
VSX1-207ENST00000557285 ADCYAP1R1P41586 468 aa19.38■□□□□ 0.69
VSX1-207ENST00000557285 IFIT1BQ5T764 474 aaKnown RBP19.38■□□□□ 0.69
VSX1-207ENST00000557285 MAMDC4Q6UXC1 1216 aa19.38■□□□□ 0.69
VSX1-207ENST00000557285 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.38■□□□□ 0.69
VSX1-207ENST00000557285 ZNF467Q7Z7K2 595 aaPredicted RBP19.38■□□□□ 0.69
VSX1-207ENST00000557285 MSL3Q8N5Y2 521 aaKnown RBP19.38■□□□□ 0.69
VSX1-207ENST00000557285 PURBQ96QR8 312 aaKnown RBP19.38■□□□□ 0.69
VSX1-207ENST00000557285 CYP39A1Q9NYL5 469 aa19.38■□□□□ 0.69
VSX1-207ENST00000557285 TRIOBPQ9H2D6 2365 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 SOWAHBA6NEL2 793 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 NFIBO00712 420 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 DHX16O60231 1041 aaKnown RBP19.37■□□□□ 0.69
VSX1-207ENST00000557285 NT5C2P49902 561 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 ACVR2BQ13705 512 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 USH1GQ495M9 461 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 GPATCH4Q5T3I0 446 aaKnown RBP19.37■□□□□ 0.69
VSX1-207ENST00000557285 KIAA1211Q6ZU35 1233 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 CHST3Q7LGC8 479 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 RALYLQ86SE5 291 aaKnown RBP19.37■□□□□ 0.69
VSX1-207ENST00000557285 FAM133AQ8N9E0 248 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 FAM184BQ9ULE4 1060 aa19.37■□□□□ 0.69
VSX1-207ENST00000557285 RBM8AQ9Y5S9 174 aaKnown RBP19.37■□□□□ 0.69
VSX1-207ENST00000557285 RANBP2P49792 3224 aaKnown RBP19.37■□□□□ 0.69
VSX1-207ENST00000557285 LCTP09848 1927 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms