RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 OTUD7AQ8TE49 926 aaPredicted RBP17.16■□□□□ 0.34
VRTN-202ENST00000557177 CDX2Q99626 313 aaPredicted RBP17.16■□□□□ 0.34
VRTN-202ENST00000557177 TTYH1Q9H313 450 aaPredicted RBP17.16■□□□□ 0.34
VRTN-202ENST00000557177 ABHD16BQ9H3Z7 469 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 CTDP1Q9Y5B0 961 aaPredicted RBP17.16■□□□□ 0.34
VRTN-202ENST00000557177 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
VRTN-202ENST00000557177 FOXP2O15409 715 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 FDX1P10109 184 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 STAT2P52630 851 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 IRX5P78411 483 aaPredicted RBP17.15■□□□□ 0.34
VRTN-202ENST00000557177 TFAP4Q01664 338 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 PPARAQ07869 468 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 CCDC144BQ3MJ40 725 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 ARMCX2Q7L311 632 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.15■□□□□ 0.34
VRTN-202ENST00000557177 GMCL1Q96IK5 515 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 FSD1Q9BTV5 496 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 KATNBL1Q9H079 304 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 NAPBQ9H115 298 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 UPF3AQ9H1J1 476 aaKnown RBP17.15■□□□□ 0.34
VRTN-202ENST00000557177 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 ZNF536O15090 1300 aa17.15■□□□□ 0.34
VRTN-202ENST00000557177 DCDC2CA8MYV0 355 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 SLC3A2P08195 630 aaKnown RBP17.14■□□□□ 0.33
VRTN-202ENST00000557177 GJA9P57773 515 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 FPGSQ05932 587 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 FAM133AQ8N9E0 248 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
VRTN-202ENST00000557177 TBX21Q9UL17 535 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
VRTN-202ENST00000557177 ELP1O95163 1332 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
VRTN-202ENST00000557177 PLA2G6O60733 806 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 ASGR1P07306 291 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 C6orf222P0C671 652 aaPredicted RBP17.13■□□□□ 0.33
VRTN-202ENST00000557177 MX1P20591 662 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 CDK7P50613 346 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 NKX3-2P78367 333 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 FAM160B2Q86V87 743 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
VRTN-202ENST00000557177 STAG1Q8WVM7 1258 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 GLT1D1Q96MS3 346 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 ACAD9Q9H845 621 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 HOMER2Q9NSB8 354 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 MROH7Q68CQ1 1323 aa17.13■□□□□ 0.33
VRTN-202ENST00000557177 TMEM265A0A087WTH1 108 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 CTAGE5O15320 804 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 TIMP1P01033 207 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 SLC1A4P43007 532 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 CNTN2Q02246 1040 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 AGBL1Q96MI9 1066 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 COL25A1Q9BXS0 654 aaPredicted RBP17.12■□□□□ 0.33
VRTN-202ENST00000557177 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
VRTN-202ENST00000557177 IL17RBQ9NRM6 502 aa17.12■□□□□ 0.33
VRTN-202ENST00000557177 LCTP09848 1927 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 MCCP23508 829 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 NOVP48745 357 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 TKFCQ3LXA3 575 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 CCDC129Q6ZRS4 1044 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 RNF146Q9NTX7 359 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
VRTN-202ENST00000557177 A0A0U1RQG5 324 aaPredicted RBP17.1■□□□□ 0.33
VRTN-202ENST00000557177 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.1■□□□□ 0.33
VRTN-202ENST00000557177 SOWAHBA6NEL2 793 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 CTDSPL2Q05D32 466 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 MFSD5Q6N075 450 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
VRTN-202ENST00000557177 MYLIPQ8WY64 445 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 INCENPQ9NQS7 918 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 STX8Q9UNK0 236 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 ASTN1O14525 1302 aa17.1■□□□□ 0.33
VRTN-202ENST00000557177 ARVCFO00192 962 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 NMT2O60551 498 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 IKQ13123 557 aaPredicted RBP17.09■□□□□ 0.33
VRTN-202ENST00000557177 RCSD1Q6JBY9 416 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 KCTD1Q719H9 257 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 RASGRP2Q7LDG7 609 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 FAM126BQ8IXS8 530 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 CHMP4CQ96CF2 233 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.09■□□□□ 0.33
VRTN-202ENST00000557177 PRR12Q9ULL5 1215 aa17.09■□□□□ 0.33
VRTN-202ENST00000557177 ISY1Q9ULR0 285 aaKnown RBP17.09■□□□□ 0.33
VRTN-202ENST00000557177 GNEQ9Y223 722 aaKnown RBP17.09■□□□□ 0.33
VRTN-202ENST00000557177 ASB14A6NK59 587 aa17.08■□□□□ 0.32
VRTN-202ENST00000557177 FGRP09769 529 aa17.08■□□□□ 0.32
VRTN-202ENST00000557177 ALAS1P13196 640 aa17.08■□□□□ 0.32
VRTN-202ENST00000557177 TNFAIP2Q03169 654 aa17.08■□□□□ 0.32
VRTN-202ENST00000557177 VPS53Q5VIR6 699 aa17.08■□□□□ 0.32
VRTN-202ENST00000557177 C16orf59Q7L2K0 433 aa17.08■□□□□ 0.32
VRTN-202ENST00000557177 CYP39A1Q9NYL5 469 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms