RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ZSCAN10Q96SZ4 725 aaPredicted RBP14□□□□□ -0.17
SYNE2-226ENST00000557084 IL25Q9H293 177 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 C11orf49Q9H6J7 331 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 ACAD9Q9H845 621 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 DIS3Q9Y2L1 958 aaKnown RBP14□□□□□ -0.17
SYNE2-226ENST00000557084 SGSM2O43147 1006 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 ALAS1P13196 640 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 CYBAP13498 195 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 ZNF792Q3KQV3 632 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 LHX8Q68G74 356 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 RASGRP2Q7LDG7 609 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 RALYLQ86SE5 291 aaKnown RBP13.99□□□□□ -0.17
SYNE2-226ENST00000557084 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
SYNE2-226ENST00000557084 AGBL1Q96MI9 1066 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 RNF146Q9NTX7 359 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 ZSWIM5Q9P217 1185 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 DNAH12Q6ZR08 3092 aa13.99□□□□□ -0.17
SYNE2-226ENST00000557084 H0YGN5 161 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 SEPT4O43236 478 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 PDHBP11177 359 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 PTH1RQ03431 593 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 PRAMEF19Q5SWL8 479 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
SYNE2-226ENST00000557084 TTBK2Q6IQ55 1244 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 CASC1Q6TDU7 716 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 ARRDC4Q8NCT1 418 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 PNMA1Q8ND90 353 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 TRERF1Q96PN7 1200 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 NRBP1Q9UHY1 535 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
SYNE2-226ENST00000557084 COL11A1P12107 1806 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-226ENST00000557084 PARP14Q460N5 1801 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 TNKSO95271 1327 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 ERICH2A1L162 156 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 POTEB2H3BUK9 544 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 DHX16O60231 1041 aaKnown RBP13.97□□□□□ -0.17
SYNE2-226ENST00000557084 ICAM1P05362 532 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 ZNF543Q08ER8 600 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 SART3Q15020 963 aaKnown RBP13.97□□□□□ -0.17
SYNE2-226ENST00000557084 IFIT1BQ5T764 474 aaKnown RBP13.97□□□□□ -0.17
SYNE2-226ENST00000557084 ANO1Q5XXA6 986 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 MSL3Q8N5Y2 521 aaKnown RBP13.97□□□□□ -0.17
SYNE2-226ENST00000557084 ENAHQ8N8S7 591 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-226ENST00000557084 ZNF236Q9UL36 1845 aa13.97□□□□□ -0.17
SYNE2-226ENST00000557084 PFASO15067 1338 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 IGHA2P01877 340 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 CYP21A2P08686 494 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 RARBP10826 455 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 BMP2KLQ5H9B9 411 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 NSMFQ6X4W1 530 aa13.96□□□□□ -0.17
SYNE2-226ENST00000557084 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
SYNE2-226ENST00000557084 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
SYNE2-226ENST00000557084 ZNF536O15090 1300 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 SYNGAP1Q96PV0 1343 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 DNAJC25-GNG10A0A024R161 153 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 IFIT3O14879 490 aaKnown RBP13.95□□□□□ -0.18
SYNE2-226ENST00000557084 PARP1P09874 1014 aaKnown RBP13.95□□□□□ -0.18
SYNE2-226ENST00000557084 SNHG28P0DPA3 235 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNE2-226ENST00000557084 ZNF467Q7Z7K2 595 aaPredicted RBP13.95□□□□□ -0.18
SYNE2-226ENST00000557084 NCOA7Q8NI08 942 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 ANKS1AQ92625 1134 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 MAP4K1Q92918 833 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 ESYT1Q9BSJ8 1104 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 ANO2Q9NQ90 1003 aa13.95□□□□□ -0.18
SYNE2-226ENST00000557084 A1CFQ9NQ94 594 aaKnown RBP13.95□□□□□ -0.18
SYNE2-226ENST00000557084 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
SYNE2-226ENST00000557084 E7EWF7 191 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 DNM1LO00429 736 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 AKR1A1P14550 325 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 TAL1P17542 331 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-226ENST00000557084 RANBP2P49792 3224 aaKnown RBP13.94□□□□□ -0.18
SYNE2-226ENST00000557084 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 ASPRV1Q53RT3 343 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 GJC2Q5T442 439 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-226ENST00000557084 SKAP1Q86WV1 359 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 C7orf61Q8IZ16 206 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 SENP6Q9GZR1 1112 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-226ENST00000557084 UBA5Q9GZZ9 404 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.94□□□□□ -0.18
SYNE2-226ENST00000557084 FAM184BQ9ULE4 1060 aa13.94□□□□□ -0.18
SYNE2-226ENST00000557084 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 ASB14A6NK59 587 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 MNX1P50219 401 aaPredicted RBP13.93□□□□□ -0.18
SYNE2-226ENST00000557084 MUM1L1Q5H9M0 696 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 MAMDC4Q6UXC1 1216 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
SYNE2-226ENST00000557084 CYB5R4Q7L1T6 521 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 ARMCX2Q7L311 632 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 RNF180Q86T96 592 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 ABHD16BQ9H3Z7 469 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 VAT1LQ9HCJ6 419 aa13.93□□□□□ -0.18
SYNE2-226ENST00000557084 CYP39A1Q9NYL5 469 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms