RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ATP2A1O14983 1001 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 RASA1P20936 1047 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 CYP2C18P33260 490 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 GJA9P57773 515 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 ADGRE1Q14246 886 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 CCDC85BQ15834 202 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 AKNAD1Q5T1N1 836 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 PSRC1Q6PGN9 363 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 ARMCX2Q7L311 632 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 SIRT2Q8IXJ6 389 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 ANKRD35Q8N283 1001 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 UPF3AQ9H1J1 476 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 ABHD16BQ9H3Z7 469 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 RAVER2Q9HCJ3 691 aaKnown RBP10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 CXXC1Q9P0U4 656 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 THEGQ9P2T0 379 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 RAPGEFL1Q9UHV5 662 aa10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 CTDP1Q9Y5B0 961 aaPredicted RBP10.82□□□□□ -0.68
HNRNPC-227ENST00000556897 CTAGE5O15320 804 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 TLR3O15455 904 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 ZBED4O75132 1171 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 HMMRO75330 724 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 IGFBP4P22692 258 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 BEX3Q00994 111 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 RPAP2Q8IXW5 612 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 CCDC144CPQ8IYA2 1237 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 MKNK2Q9HBH9 465 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 SLC38A10Q9HBR0 1119 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 HOMER2Q9NSB8 354 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 NYAP2Q9P242 653 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 CLIP2Q9UDT6 1046 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 MSRAQ9UJ68 235 aa10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 GREB1LQ9C091 1923 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-227ENST00000556897 CHD9Q3L8U1 2897 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 MINDY4BA8MYZ0 360 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 CD4P01730 458 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 MRPS5P82675 430 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 CNTN2Q02246 1040 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 RAB30Q15771 203 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 CXCL17Q6UXB2 119 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 NOL8Q76FK4 1167 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 HERVK_113Q902F9 699 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 STRBPQ96SI9 672 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 KATNBL1Q9H079 304 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 HIPK3Q9H422 1215 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 FBXO40Q9UH90 709 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 YBX2Q9Y2T7 364 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 UMODL1Q5DID0 1318 aa10.8□□□□□ -0.68
HNRNPC-227ENST00000556897 XIRP2A4UGR9 3374 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 BDP1A6H8Y1 2624 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 CHD7Q9P2D1 2997 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 IGKV6D-41A0A0C4DH26 115 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 GSG1L2A8MUP6 293 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 PRDM1O75626 825 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 FGBP02675 491 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 PTGS1P23219 599 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 OAZ1P54368 228 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 SBK1Q52WX2 424 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 OTOP2Q7RTS6 562 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 LRRC47Q8N1G4 583 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 CHST13Q8NET6 341 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 CEP95Q96GE4 821 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 UHRF1Q96T88 793 aaPredicted RBP10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 MTIF3Q9H2K0 278 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 SLC28A3Q9HAS3 691 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 ZBTB40Q9NUA8 1239 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 FEM1BQ9UK73 627 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 MYH7P12883 1935 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 ASTN1O14525 1302 aa10.79□□□□□ -0.68
HNRNPC-227ENST00000556897 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 RABGGTBP53611 331 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 CCL23P55773 120 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 NKX3-2P78367 333 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 ITGA7Q13683 1181 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 FSCN1Q16658 493 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 TLK2Q86UE8 772 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 FAM133AQ8N9E0 248 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 SLC43A3Q8NBI5 491 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 IL27Q8NEV9 243 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 MKL1Q969V6 931 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 NECAB3Q96P71 396 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 MTMR4Q9NYA4 1195 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 GNEQ9Y223 722 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 COG6Q9Y2V7 657 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 GRIN2DO15399 1336 aa10.78□□□□□ -0.68
HNRNPC-227ENST00000556897 GBF1Q92538 1859 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 SOWAHBA6NEL2 793 aa10.77□□□□□ -0.69
HNRNPC-227ENST00000556897 B4GALT4O60513 344 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms