RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
HNRNPC-226ENST00000556628 CTDP1Q9Y5B0 961 aaPredicted RBP9.16□□□□□ -0.94
HNRNPC-226ENST00000556628 HTTP42858 3142 aa9.16□□□□□ -0.94
HNRNPC-226ENST00000556628 A0A0G2JMZ2 1700 aa9.16□□□□□ -0.94
HNRNPC-226ENST00000556628 RLFQ13129 1914 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 PARP14Q460N5 1801 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 SMIM22K7EJ46 135 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 MSCO60682 206 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 ERCC3P19447 782 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 RASA1P20936 1047 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 CNGA1P29973 690 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 PTGDRQ13258 359 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 KIAA1755Q5JYT7 1200 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 ZMYM1Q5SVZ6 1142 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 SIAH1Q8IUQ4 282 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 OTUD7AQ8TE49 926 aaPredicted RBP9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 EVI5LQ96CN4 794 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 SEC62Q99442 399 aaKnown RBP9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 C11orf49Q9H6J7 331 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 EPB41L4AQ9HCS5 686 aaPredicted RBP9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 NYAP2Q9P242 653 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 CLIP2Q9UDT6 1046 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 OGDHLQ9ULD0 1010 aa9.15□□□□□ -0.94
HNRNPC-226ENST00000556628 GREB1LQ9C091 1923 aaPredicted RBP9.15□□□□□ -0.95
HNRNPC-226ENST00000556628 COL11A1P12107 1806 aaPredicted RBP9.15□□□□□ -0.95
HNRNPC-226ENST00000556628 ZNF236Q9UL36 1845 aa9.15□□□□□ -0.95
HNRNPC-226ENST00000556628 F5H6K3 240 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 HOXC6P09630 235 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 TSPY3P0CV98 308 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 TSPY8P0CW00 308 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 FCER1AP12319 257 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 FECHP22830 423 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 ADORA2AP29274 412 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 CCND3P30281 292 aaPredicted RBP9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 COPB2P35606 906 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 KLRC3Q07444 240 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 FAM83BQ5T0W9 1011 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 TRAF7Q6Q0C0 670 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 ABRAQ8N0Z2 381 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 NPLOC4Q8TAT6 608 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 STAP2Q9UGK3 403 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 PPP1R9AQ9ULJ8 1098 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 FRMPD3Q5JV73 1810 aa9.14□□□□□ -0.95
HNRNPC-226ENST00000556628 ZNFX1Q9P2E3 1918 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 SALL3Q9BXA9 1300 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 ZBED4O75132 1171 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 RNF40O75150 1001 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 PRDM1O75626 825 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 TTLL1O95922 423 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 CYP2C19P33261 490 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 STAT3P40763 770 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 PDE1AP54750 535 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 PPARAQ07869 468 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 HIC1Q14526 733 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 KCTD2Q14681 263 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 TMEM132BQ14DG7 1078 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 OLFML2BQ68BL8 750 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 PRPF38AQ8NAV1 312 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 DIS3LQ8TF46 1054 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 CEP95Q96GE4 821 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 MMP19Q99542 508 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 SLF1Q9BQI6 1058 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 FBXO28Q9NVF7 368 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 RBM27Q9P2N5 1060 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 DDX20Q9UHI6 824 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 ISY1Q9ULR0 285 aaKnown RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 SYNPO2Q9UMS6 1093 aa9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 V9GY48 417 aaPredicted RBP9.13□□□□□ -0.95
HNRNPC-226ENST00000556628 ALPK3Q96L96 1907 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 TSPY2A6NKD2 308 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 C3orf80F5H4A9 247 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 VWA5AO00534 786 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 NRG2O14511 850 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 NDUFB10O96000 172 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 TFAP4Q01664 338 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 IKQ13123 557 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 TICAM2Q86XR7 235 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 RIOX2Q8IUF8 465 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 C7orf61Q8IZ16 206 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 NEDD1Q8NHV4 660 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 MKL1Q969V6 931 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 RILPL2Q969X0 211 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 NUP88Q99567 741 aaPredicted RBP9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 LNPKQ9C0E8 428 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 HELLSQ9NRZ9 838 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 MTMR4Q9NYA4 1195 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 FLRT1Q9NZU1 646 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 FEM1BQ9UK73 627 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 ADAMTS5Q9UNA0 930 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 PLXNA1Q9UIW2 1896 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 CENPFP49454 3210 aa9.12□□□□□ -0.95
HNRNPC-226ENST00000556628 IGKV6D-41A0A0C4DH26 115 aa9.11□□□□□ -0.95
HNRNPC-226ENST00000556628 KBTBD13C9JR72 458 aa9.11□□□□□ -0.95
HNRNPC-226ENST00000556628 COBLO75128 1261 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms