RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 ANO2Q9NQ90 1003 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 PPP4R2Q9NY27 417 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 DIS3Q9Y2L1 958 aaKnown RBP13.52□□□□□ -0.25
SLIRP-206ENST00000556375 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.25
SLIRP-206ENST00000556375 MCM3APO60318 1980 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 LCTP09848 1927 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-206ENST00000556375 PGK2P07205 417 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 CYP2C19P33261 490 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 SLC16A2P36021 539 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 SLC4A3P48751 1232 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 SEC23AQ15436 765 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 IFIT1BQ5T764 474 aaKnown RBP13.51□□□□□ -0.25
SLIRP-206ENST00000556375 UBE2Q1Q7Z7E8 422 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 ACAD9Q9H845 621 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 RNF146Q9NTX7 359 aa13.51□□□□□ -0.25
SLIRP-206ENST00000556375 LRRC37A2A6NM11 1700 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 DNAJC25-GNG10A0A024R161 153 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 TFRCP02786 760 aaKnown RBP13.5□□□□□ -0.25
SLIRP-206ENST00000556375 ICAM1P05362 532 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 CYBAP13498 195 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 CCND3P30281 292 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-206ENST00000556375 ASPRV1Q53RT3 343 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 CCDC174Q6PII3 467 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 MB21D2Q8IYB1 491 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-206ENST00000556375 ANKLE1Q8NAG6 615 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 AGBL1Q96MI9 1066 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 HOMER2Q9NSB8 354 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 CCPG1Q9ULG6 757 aa13.5□□□□□ -0.25
SLIRP-206ENST00000556375 WDR19Q8NEZ3 1342 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 ERICH2A1L162 156 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 SLC27A2O14975 620 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 MSCO60682 206 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 ALAS1P13196 640 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 SNAP25P60880 206 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 SART3Q15020 963 aaKnown RBP13.49□□□□□ -0.25
SLIRP-206ENST00000556375 NECTIN1Q15223 517 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 ANKRD35Q8N283 1001 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
SLIRP-206ENST00000556375 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 NRBP1Q9UHY1 535 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 PNMA2Q9UL42 364 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 OGDHLQ9ULD0 1010 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 CEP290O15078 2479 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 ALPK3Q96L96 1907 aa13.49□□□□□ -0.25
SLIRP-206ENST00000556375 PFASO15067 1338 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 IFIT3O14879 490 aaKnown RBP13.48□□□□□ -0.25
SLIRP-206ENST00000556375 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
SLIRP-206ENST00000556375 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 ANTXR2P58335 489 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 LHX8Q68G74 356 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-206ENST00000556375 TRERF1Q96PN7 1200 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 TINF2Q9BSI4 451 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
SLIRP-206ENST00000556375 A1CFQ9NQ94 594 aaKnown RBP13.48□□□□□ -0.25
SLIRP-206ENST00000556375 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
SLIRP-206ENST00000556375 SYNGAP1Q96PV0 1343 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 SEPT4O43236 478 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 CNGA1P29973 690 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 WTAPQ15007 396 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 MAMDC4Q6UXC1 1216 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 FGD4Q96M96 766 aa13.47□□□□□ -0.25
SLIRP-206ENST00000556375 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-206ENST00000556375 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-206ENST00000556375 MUM1L1Q5H9M0 696 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 TMEM67Q5HYA8 995 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 FAM133AQ8N9E0 248 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 UBA5Q9GZZ9 404 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 CPVLQ9H3G5 476 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 CYP39A1Q9NYL5 469 aa13.46□□□□□ -0.25
SLIRP-206ENST00000556375 PRC1O43663 620 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 MCM5P33992 734 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-206ENST00000556375 GRM4Q14833 912 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 PRPF38BQ5VTL8 546 aaKnown RBP13.45□□□□□ -0.26
SLIRP-206ENST00000556375 NSMFQ6X4W1 530 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 NECAB2Q7Z6G3 386 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 ADGRF4Q8IZF3 695 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 IGDCC4Q8TDY8 1250 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 DIS3LQ8TF46 1054 aaKnown RBP13.45□□□□□ -0.26
SLIRP-206ENST00000556375 PAWRQ96IZ0 340 aaKnown RBP13.45□□□□□ -0.26
SLIRP-206ENST00000556375 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 SENP2Q9HC62 589 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
SLIRP-206ENST00000556375 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-206ENST00000556375 KLRF2D3W0D1 207 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 NFIBO00712 420 aa13.44□□□□□ -0.26
SLIRP-206ENST00000556375 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
SLIRP-206ENST00000556375 CNTN2Q02246 1040 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms