RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 C1orf53Q5VUE5 145 aa14.86□□□□□ -0.03
SNX6-207ENST00000556303 DGKHQ86XP1 1220 aa14.86□□□□□ -0.03
SNX6-207ENST00000556303 GDF15Q99988 308 aa14.86□□□□□ -0.03
SNX6-207ENST00000556303 PLXNA1Q9UIW2 1896 aa14.86□□□□□ -0.03
SNX6-207ENST00000556303 FRMPD3Q5JV73 1810 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 LRRC26Q2I0M4 334 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 RRP12Q5JTH9 1297 aaKnown RBP14.85□□□□□ -0.03
SNX6-207ENST00000556303 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 RNF180Q86T96 592 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 TMEM47Q9BQJ4 181 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 ABHD16BQ9H3Z7 469 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 PRR12Q9ULL5 1215 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 ISY1Q9ULR0 285 aaKnown RBP14.85□□□□□ -0.03
SNX6-207ENST00000556303 ZNF536O15090 1300 aa14.85□□□□□ -0.03
SNX6-207ENST00000556303 LAMA2P24043 3122 aaKnown RBP14.85□□□□□ -0.03
SNX6-207ENST00000556303 HAND2P61296 217 aa14.84□□□□□ -0.03
SNX6-207ENST00000556303 LRRC41Q15345 812 aa14.84□□□□□ -0.03
SNX6-207ENST00000556303 IMMTQ16891 758 aaKnown RBP14.84□□□□□ -0.03
SNX6-207ENST00000556303 KCTD1Q719H9 257 aa14.84□□□□□ -0.03
SNX6-207ENST00000556303 IQCA1Q86XH1 822 aa14.84□□□□□ -0.03
SNX6-207ENST00000556303 TSEN34Q9BSV6 310 aaKnown RBP14.84□□□□□ -0.03
SNX6-207ENST00000556303 FAM184BQ9ULE4 1060 aa14.84□□□□□ -0.03
SNX6-207ENST00000556303 LOC102724159A0A0B4J2E5 919 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 SNAI1O95863 264 aaPredicted RBP14.83□□□□□ -0.04
SNX6-207ENST00000556303 ICAM1P05362 532 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 SLC4A3P48751 1232 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 SNX17Q15036 470 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 PWP2Q15269 919 aaKnown RBP14.83□□□□□ -0.04
SNX6-207ENST00000556303 GJC2Q5T442 439 aaPredicted RBP14.83□□□□□ -0.04
SNX6-207ENST00000556303 TTC22Q5TAA0 569 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 SLC39A5Q6ZMH5 540 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 FAM133AQ8N9E0 248 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 RUFY2Q8WXA3 655 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 ANKS1AQ92625 1134 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 AGBL1Q96MI9 1066 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 TRERF1Q96PN7 1200 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 MAF1Q9H063 256 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
SNX6-207ENST00000556303 CNNM2Q9H8M5 875 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 XPNPEP3Q9NQH7 507 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 RNF146Q9NTX7 359 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 RAD50Q92878 1312 aa14.83□□□□□ -0.04
SNX6-207ENST00000556303 ASB14A6NK59 587 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 DUSP11O75319 330 aaKnown RBP14.82□□□□□ -0.04
SNX6-207ENST00000556303 PDHBP11177 359 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 ACVR2BQ13705 512 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 CCDC96Q2M329 555 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 GPATCH4Q5T3I0 446 aaKnown RBP14.82□□□□□ -0.04
SNX6-207ENST00000556303 SYDE2Q5VT97 1194 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 TBC1D10CQ8IV04 446 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 KRT23Q9C075 422 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 A1CFQ9NQ94 594 aaKnown RBP14.82□□□□□ -0.04
SNX6-207ENST00000556303 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.82□□□□□ -0.04
SNX6-207ENST00000556303 ZMYND8Q9ULU4 1186 aaPredicted RBP14.82□□□□□ -0.04
SNX6-207ENST00000556303 PHF24Q9UPV7 400 aa14.82□□□□□ -0.04
SNX6-207ENST00000556303 ALAS1P13196 640 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 TAL1P17542 331 aaPredicted RBP14.81□□□□□ -0.04
SNX6-207ENST00000556303 PDE4AP27815 886 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 ZNF543Q08ER8 600 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 ANO1Q5XXA6 986 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 FGD4Q96M96 766 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 SPC25Q9HBM1 224 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 HOMER2Q9NSB8 354 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 CCPG1Q9ULG6 757 aa14.81□□□□□ -0.04
SNX6-207ENST00000556303 MOXD2PA6NHM9 499 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 ADAMTS4O75173 837 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
SNX6-207ENST00000556303 CST5P28325 142 aaPredicted RBP14.8□□□□□ -0.04
SNX6-207ENST00000556303 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
SNX6-207ENST00000556303 RTP1P59025 263 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 CCDC174Q6PII3 467 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 ARMCX2Q7L311 632 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 KLHDC9Q8NEP7 349 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 NUP133Q8WUM0 1156 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 CYP39A1Q9NYL5 469 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 NEDD4P46934 1319 aa14.8□□□□□ -0.04
SNX6-207ENST00000556303 SYN1P17600 705 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 ATN1P54259 1190 aaPredicted RBP14.79□□□□□ -0.04
SNX6-207ENST00000556303 NKX3-2P78367 333 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 LRIT3Q3SXY7 679 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 TTBK2Q6IQ55 1244 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 CCDC144CPQ8IYA2 1237 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 PCSK9Q8NBP7 692 aaKnown RBP14.79□□□□□ -0.04
SNX6-207ENST00000556303 WDR19Q8NEZ3 1342 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
SNX6-207ENST00000556303 LBHD1Q9BQE6 289 aaPredicted RBP14.79□□□□□ -0.04
SNX6-207ENST00000556303 ZSWIM5Q9P217 1185 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 ZHX1Q9UKY1 873 aaPredicted RBP14.79□□□□□ -0.04
SNX6-207ENST00000556303 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
SNX6-207ENST00000556303 KDM4AO75164 1064 aa14.78□□□□□ -0.04
SNX6-207ENST00000556303 PGK1P00558 417 aa14.78□□□□□ -0.04
SNX6-207ENST00000556303 SLC16A2P36021 539 aa14.78□□□□□ -0.04
SNX6-207ENST00000556303 GJA9P57773 515 aa14.78□□□□□ -0.04
SNX6-207ENST00000556303 CNTN2Q02246 1040 aa14.78□□□□□ -0.04
SNX6-207ENST00000556303 CCDC144BQ3MJ40 725 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms