RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
NEK9-209ENST00000556170 KIF1AQ12756 1690 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 LMO7Q8WWI1 1683 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 ACTN4O43707 911 aaKnown RBP16.6■□□□□ 0.25
NEK9-209ENST00000556170 SNAP25P60880 206 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 CUL5Q93034 780 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 QTRT2Q9H974 415 aaKnown RBP16.6■□□□□ 0.25
NEK9-209ENST00000556170 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 CHMP2AO43633 222 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 KRT86O43790 486 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 ORC4O43929 436 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 SYCP1Q15431 976 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 KMT5BQ4FZB7 885 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 SLC51AQ86UW1 340 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 OR8K1Q8NGG5 319 aa16.6■□□□□ 0.25
NEK9-209ENST00000556170 WDR24Q96S15 920 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 LZTS2Q9BRK4 669 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 CENPHQ9H3R5 247 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 DISC1Q9NRI5 854 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
NEK9-209ENST00000556170 SLC35F6Q8N357 371 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 POLD4Q9HCU8 107 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 H7C1D1 291 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 EIF3JO75822 258 aaKnown RBP16.59■□□□□ 0.25
NEK9-209ENST00000556170 NOP2P46087 812 aaKnown RBP16.59■□□□□ 0.25
NEK9-209ENST00000556170 PLS1Q14651 629 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 TYW1BQ6NUM6 668 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 CNNM4Q6P4Q7 775 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 NAPGQ99747 312 aaPredicted RBP16.59■□□□□ 0.25
NEK9-209ENST00000556170 SERPINB13Q9UIV8 391 aa16.59■□□□□ 0.25
NEK9-209ENST00000556170 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 APBA3O96018 575 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 RNASE9P60153 205 aaKnown RBP16.58■□□□□ 0.25
NEK9-209ENST00000556170 TXNRD1Q16881 649 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 RBM26Q5T8P6 1007 aaKnown RBP16.58■□□□□ 0.25
NEK9-209ENST00000556170 ZNF658Q5TYW1 1059 aaPredicted RBP16.58■□□□□ 0.25
NEK9-209ENST00000556170 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 TEKT1Q969V4 418 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 SPAG5Q96R06 1193 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 TUBGCP2Q9BSJ2 902 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.25
NEK9-209ENST00000556170 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
NEK9-209ENST00000556170 BMP6P22004 513 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 GRIK5Q16478 980 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 LMAN1P49257 510 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 KRT83P78385 493 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 C2CD5Q86YS7 1000 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 CEP112Q8N8E3 955 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 LUC7LQ9NQ29 371 aaKnown RBP16.58■□□□□ 0.24
NEK9-209ENST00000556170 PCDHA12Q9UN75 941 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
NEK9-209ENST00000556170 A0A087X0B3 334 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 POTEMA6NI47 508 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 WNT7AO00755 349 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 EPN1Q9Y6I3 576 aaPredicted RBP16.57■□□□□ 0.24
NEK9-209ENST00000556170 BBOX1O75936 387 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 CYP27A1Q02318 531 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 NCAPH2Q6IBW4 605 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 PPEF1O14829 653 aaPredicted RBP16.57■□□□□ 0.24
NEK9-209ENST00000556170 GDF11O95390 407 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 RCAN1P53805 252 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 NEK11Q8NG66 645 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 CEP89Q96ST8 783 aa16.57■□□□□ 0.24
NEK9-209ENST00000556170 RRAGAQ7L523 313 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 GJA10Q969M2 543 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 CALCOCO1Q9P1Z2 691 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 ANAPC4Q9UJX5 808 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 CYP4A11Q02928 519 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
NEK9-209ENST00000556170 JAKMIP2Q96AA8 810 aa16.56■□□□□ 0.24
NEK9-209ENST00000556170 CNOT6LQ96LI5 555 aaKnown RBP16.56■□□□□ 0.24
NEK9-209ENST00000556170 PAFAH1B1P43034 410 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 PRR16Q569H4 304 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 TCP11X2Q5H9J9 407 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 IPO4Q8TEX9 1081 aaKnown RBP16.55■□□□□ 0.24
NEK9-209ENST00000556170 ZBTB21Q9ULJ3 1066 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 AFDNP55196 1824 aaKnown RBP16.55■□□□□ 0.24
NEK9-209ENST00000556170 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
NEK9-209ENST00000556170 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
NEK9-209ENST00000556170 CLCN6P51797 869 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 PTPROQ16827 1216 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 NYAP1Q6ZVC0 841 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 MAEAQ7L5Y9 396 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 TC2NQ8N9U0 490 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 CFBP00751 764 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 RAPGEF1Q13905 1077 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 CERS3Q8IU89 383 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 RWDD2AQ9UIY3 292 aa16.55■□□□□ 0.24
NEK9-209ENST00000556170 TMCO5BA8MYB1 307 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 MFAP3LO75121 409 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 RASA1P20936 1047 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 POTEDQ86YR6 584 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms