RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	SLFN13	Q68D06	897 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	NOL8	Q76FK4	1167 aa	Known RBP	13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	CLEC10A	Q8IUN9	316 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	NECAB1	Q8N987	351 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	VCPKMT	Q9H867	229 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	MAD2L2	Q9UI95	211 aa		13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.15	□□□□□ -0.3
RAD51B-222	ENST00000555907	CDC27	P30260	824 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	CCT2	P78371	535 aa	Known RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	ATP2B2	Q01814	1243 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	FUT2	Q10981	343 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	STK3	Q13188	491 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	ASPRV1	Q53RT3	343 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	GPATCH4	Q5T3I0	446 aa	Known RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	CPLX2	Q6PUV4	134 aa	Known RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	USP17L2	Q6R6M4	530 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	MICU3	Q86XE3	530 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	CCDC83	Q8IWF9	413 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	LRRC47	Q8N1G4	583 aa	Known RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	ANKRD13C	Q8N6S4	541 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	CTCFL	Q8NI51	663 aa	Predicted RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	SMARCC2	Q8TAQ2	1214 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	NUP133	Q8WUM0	1156 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	LPAR1	Q92633	364 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	C12orf42	Q96LP6	360 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	MYL10	Q9BUA6	226 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	CWC22	Q9HCG8	908 aa	Known RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	GOPC	Q9HD26	462 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	TMOD4	Q9NZQ9	345 aa		13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	DAXX	Q9UER7	740 aa	Predicted RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.14	□□□□□ -0.31
RAD51B-222	ENST00000555907	CDKL5	O76039	1030 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	CTDNEP1	O95476	244 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	NDUFB10	O96000	172 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	PARP1	P09874	1014 aa	Known RBP	13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	ZNF543	Q08ER8	600 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	BTNL9	Q6UXG8	535 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	TMTC3	Q6ZXV5	915 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	DEFB123	Q8N688	67 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	RGS22	Q8NE09	1264 aa		13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	NCOA5	Q9HCD5	579 aa	Known RBP	13.13	□□□□□ -0.31
RAD51B-222	ENST00000555907	MYH4	Q9Y623	1939 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	KLRF2	D3W0D1	207 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	CPLX1	O14810	134 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	BMP3	P12645	472 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	PDIA4	P13667	645 aa	Known RBP	13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	RXRA	P19793	462 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	SLC1A4	P43007	532 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	GCLC	P48506	637 aa	Predicted RBP	13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	HMGN5	P82970	282 aa	Known RBP	13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	NSUN7	Q8NE18	718 aa	Known RBP	13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	SPZ1	Q9BXG8	430 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	RIOX1	Q9H6W3	641 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	EMILIN3	Q9NT22	766 aa		13.12	□□□□□ -0.31
RAD51B-222	ENST00000555907	WDR46	O15213	610 aa	Known RBP	13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	PRPF3	O43395	683 aa	Known RBP	13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	SLC4A3	P48751	1232 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	IRX3	P78415	501 aa	Predicted RBP	13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	FAM110C	Q1W6H9	321 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	KIAA1755	Q5JYT7	1200 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	NECAB2	Q7Z6G3	386 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	RAB11FIP4	Q86YS3	637 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	STAG2	Q8N3U4	1231 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	SRBD1	Q8N5C6	995 aa	Known RBP	13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	RNF26	Q9BY78	433 aa	Predicted RBP	13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	SMC3	Q9UQE7	1217 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907	STK36	Q9NRP7	1315 aa		13.11	□□□□□ -0.31
RAD51B-222	ENST00000555907		A0A1W2PPC1	479 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	HSP90AA1	P07900	732 aa	Known RBP	13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	HOXA7	P31268	230 aa	Predicted RBP	13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	SSRP1	Q08945	709 aa	Known RBP	13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	TRIM32	Q13049	653 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	CCDC144CP	Q8IYA2	1237 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	CHURC1	Q8WUH1	139 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	COA7	Q96BR5	231 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	MTMR8	Q96EF0	704 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	P2RX7	Q99572	595 aa	Known RBP	13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	FEZ1	Q99689	392 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	FEM1B	Q9UK73	627 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	KIF3A	Q9Y496	699 aa		13.1	□□□□□ -0.31
RAD51B-222	ENST00000555907	RANBP2	P49792	3224 aa	Known RBP	13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	PTPDC1	A2A3K4	754 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	CYTH3	O43739	400 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	PLEKHA8P1	O95397	391 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	FDPS	P14324	419 aa	Known RBP	13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	DDIT3	P35638	169 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	ZYX	Q15942	572 aa	Known RBP	13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	SLC35G1	Q2M3R5	365 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	FAM160B2	Q86V87	743 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	TRIM22	Q8IYM9	498 aa		13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	FAM177A1	Q8N128	213 aa	Predicted RBP	13.09	□□□□□ -0.31
RAD51B-222	ENST00000555907	JAK2	O60674	1132 aa		13.08	□□□□□ -0.32
RAD51B-222	ENST00000555907	DEXI	O95424	95 aa		13.08	□□□□□ -0.32
RAD51B-222	ENST00000555907	GOLGA8H	P0CJ92	632 aa		13.08	□□□□□ -0.32
RAD51B-222	ENST00000555907	FDX1	P10109	184 aa		13.08	□□□□□ -0.32
RAD51B-222	ENST00000555907	VCAM1	P19320	739 aa		13.08	□□□□□ -0.32
RAD51B-222	ENST00000555907	PDC	P20941	246 aa		13.08	□□□□□ -0.32
RAD51B-222	ENST00000555907	GJB2	P29033	226 aa		13.08	□□□□□ -0.32

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