RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ZNF713Q8N859 430 aaPredicted RBP12.73□□□□□ -0.37
TMEM260-208ENST00000555905 RGS22Q8NE09 1264 aa12.73□□□□□ -0.37
TMEM260-208ENST00000555905 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
TMEM260-208ENST00000555905 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
TMEM260-208ENST00000555905 AIFM3Q96NN9 605 aa12.73□□□□□ -0.37
TMEM260-208ENST00000555905 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
TMEM260-208ENST00000555905 FBXO28Q9NVF7 368 aa12.73□□□□□ -0.37
TMEM260-208ENST00000555905 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
TMEM260-208ENST00000555905 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
TMEM260-208ENST00000555905 PARP14Q460N5 1801 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 ZBED4O75132 1171 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 FDX1P10109 184 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
TMEM260-208ENST00000555905 COG2Q14746 738 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 QRICH1Q2TAL8 776 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 TREML2Q5T2D2 321 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 RASAL3Q86YV0 1011 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
TMEM260-208ENST00000555905 FBXO18Q8NFZ0 1043 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 RANBP17Q9H2T7 1088 aaKnown RBP12.72□□□□□ -0.37
TMEM260-208ENST00000555905 BARHL2Q9NY43 387 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 HOXC10Q9NYD6 342 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
TMEM260-208ENST00000555905 CCL15-CCL14A0A0B4J2E2 113 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 OSBPP22059 807 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
TMEM260-208ENST00000555905 IRX3P78415 501 aaPredicted RBP12.71□□□□□ -0.37
TMEM260-208ENST00000555905 GUCY1B3Q02153 619 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 SAFBQ15424 915 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMEM260-208ENST00000555905 CCL15Q16663 113 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 KRT40Q6A162 431 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 WWC2Q6AWC2 1192 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 FBXO11Q86XK2 927 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
TMEM260-208ENST00000555905 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 AMNQ9BXJ7 453 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 BRMS1Q9HCU9 246 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 VPS54Q9P1Q0 977 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 PNMA2Q9UL42 364 aa12.71□□□□□ -0.37
TMEM260-208ENST00000555905 STXBP3O00186 592 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 BRD1O95696 1058 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
TMEM260-208ENST00000555905 CALML3P27482 149 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 APLP1P51693 650 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 NAPAP54920 295 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 NLRP5P59047 1200 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 SNAP25P60880 206 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 MOGSQ13724 837 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 GNL2Q13823 731 aaKnown RBP12.7□□□□□ -0.38
TMEM260-208ENST00000555905 PKP1Q13835 747 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 CCDC174Q6PII3 467 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 MS4A4AQ96JQ5 239 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 SLC45A1Q9Y2W3 748 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 RLFQ13129 1914 aa12.7□□□□□ -0.38
TMEM260-208ENST00000555905 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 VWA5AO00534 786 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 PPP1R11O60927 126 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 MMP1P03956 469 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 SLC10A3P09131 477 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 GALNT17Q6IS24 598 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 PAXIP1Q6ZW49 1069 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 ANKRD23Q86SG2 305 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 COA7Q96BR5 231 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 ATG4CQ96DT6 458 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 PHF20Q9BVI0 1012 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
TMEM260-208ENST00000555905 SLC38A10Q9HBR0 1119 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 GJB4Q9NTQ9 266 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 KCNJ14Q9UNX9 436 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 PCDHA1Q9Y5I3 950 aa12.69□□□□□ -0.38
TMEM260-208ENST00000555905 COL11A1P12107 1806 aaPredicted RBP12.68□□□□□ -0.38
TMEM260-208ENST00000555905 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
TMEM260-208ENST00000555905 ICAM1P05362 532 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 GNA11P29992 359 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 KRT2P35908 639 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 OAZ1P54368 228 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 INHBEP58166 350 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 USH1GQ495M9 461 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 MB21D1Q8N884 522 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 BICD2Q8TD16 824 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 BRI3BPQ8WY22 251 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
TMEM260-208ENST00000555905 CCPG1Q9ULG6 757 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 ADAMTS5Q9UNA0 930 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 ATP6V1DQ9Y5K8 247 aa12.68□□□□□ -0.38
TMEM260-208ENST00000555905 ABCB11O95342 1321 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms